Gene SeSA_A2088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A2088 
Symbol 
ID6517236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp2005815 
End bp2006453 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content49% 
IMG OID642747168 
Producthypothetical protein 
Protein accessionYP_002114969 
Protein GI194738084 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0698] Ribose 5-phosphate isomerase RpiB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones4 
Fosmid unclonability p-value0.0000131835 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAATTG CACTGATGAT GGAAAATAGC CAGGCCAGCA AAAATGCCAT CATTTATAAC 
GAACTTAGCG CCGTCGCCAA TGAAAAGGGA TTTCCCGTTT TTAACGTCGG CATGTGCGAC 
GAAAATGACC ATCACCTGAC GTACATTCAT TTAGGCATCA TGGCGAGTAT TCTGCTTAAT 
GCAAACGCGG TTGATTTTGT GGTTACTGGC TGTGGCACCG GGCAGGGCGC GCTGATGTCG 
TTAAATATTC ATCCTGGTGT CATTTGTGGC TATTGCATCG ATCCGGCAGA TGCTTTTCTG 
TTTGCGCAGA TCAACAACGG CAATGCGTTG TCCCTGCCAT TTGCGAAAGG CTTTGGCTGG 
GGCGCTGAGC TGAACGTGCG TTTCATCTTT GAAAAAGCGT TTACCGGGCG TAAAGGCGAG 
GGGTATCCGC CTGAGCGCAA AGCGCCGCAG GTACGCAATG CGGGCATTTT GAACCAGGTT 
AAGGCCGCGG TCGTCAAAGA GAATTATCTG GATACACTGC GGGCTATCGG TCCTGAACTG 
GTTAAAACGG CGGTTTCAGG GCCGCGTTTC CAGCAATGTT TGTTTGAAAA CGGACAGAAT 
AAAGAAATAG AAGCGTTTGT ACGTGAGATG CTGGGGTAA
 
Protein sequence
MKIALMMENS QASKNAIIYN ELSAVANEKG FPVFNVGMCD ENDHHLTYIH LGIMASILLN 
ANAVDFVVTG CGTGQGALMS LNIHPGVICG YCIDPADAFL FAQINNGNAL SLPFAKGFGW 
GAELNVRFIF EKAFTGRKGE GYPPERKAPQ VRNAGILNQV KAAVVKENYL DTLRAIGPEL 
VKTAVSGPRF QQCLFENGQN KEIEAFVREM LG