Gene SeSA_A2081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A2081 
SymbolflhD 
ID6518742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp1999604 
End bp1999945 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content48% 
IMG OID642747161 
Producttranscriptional activator FlhD 
Protein accessionYP_002114962 
Protein GI194737939 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.00000102122 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones2 
Fosmid unclonability p-value0.000000325963 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCATACAT CCGAGTTGCT AAAACACATT TATGACATCA ATTTGTCATA TTTACTCCTT 
GCACAGCGTT TGATCGTCCA GGACAAAGCA TCTGCGATGT TCCGCCTCGG TATCAACGAA 
GAGATGGCAA ACACACTGGG CGCGTTGACC TTGCCGCAGA TGGTCAAACT GGCGGAGACG 
AACCAGTTAG TTTGTCATTT CCGGTTTGAC GATCATCAGA CGATCACCCG TTTGACTCAG 
GATTCGCGCG TCGATGATTT ACAGCAGATT CACACAGGTA TCATGCTTTC AACGCGTCTG 
CTCAATGAAG TGGACGATAC GGCGCGTAAG AAAAGGGCAT GA
 
Protein sequence
MHTSELLKHI YDINLSYLLL AQRLIVQDKA SAMFRLGINE EMANTLGALT LPQMVKLAET 
NQLVCHFRFD DHQTITRLTQ DSRVDDLQQI HTGIMLSTRL LNEVDDTARK KRA