Gene SeSA_A2044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A2044 
Symbol 
ID6518327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp1963643 
End bp1964962 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content55% 
IMG OID642747124 
Producthypothetical protein 
Protein accessionYP_002114925 
Protein GI194734531 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.713076 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAACAGA TAGCCCGCTC TGTCGCCCTG GCATTTAATA ATCTGCCCCG ACCCCACCGC 
GTTATGCTGG GGTCACTTAC CGTTCTGACA CTGGCCGTCG CCGTATGGCG GCCCTATGTT 
TACCACCCAG AATCCGCGCC AATCGTTAAA ACTATTGAAC TGGAGAAAAG CGAGACTCGT 
TCCCTCTTAC CGGAGGCCAG CGAACCCATC GATCAGGCCG CGCAGGAAGA TGAAGCTATT 
CCTCAGGATG AGCTGGACGA TAAAACCGCA GGCGAAGTCG GCGTCCATGA ATACGTCGTC 
TCCACAGGCG ATACGTTAAG CAGCATTCTG AATCAGTACG GCATCGATAT GAGCGATATT 
AGCCGACTTG CCGCTTCTGA TAAGGAGCTG CGCAATCTGA AAATTGGCCA ACAGCTTTCC 
TGGACACTGA CCGCCGATGG CGATTTACAG CGTCTGACAT GGGAAGTCTC CCGCCGTGAA 
ACGCGTACCT ACGATCGCAC TGCCAACGGT TTTAAAATGA GCAGTGAAAT GCAGCAGGGG 
GACTGGGTCA ACAGTCTGCT GAAAGGCACG GTAGGGGGTA GCTTTGTCGC CAGCGCGAAA 
GAGGCCGGTT TAACCAGCAG CGAAATCAGC GCAGTGATAA AAGCCATGCA GTGGCAGATG 
GATTTTCGCA AGCTGAAAAA GGGCGATGAA TTTTCGGTTC TGATGTCGCG CGAGATGCTG 
GATGGCAAGC GTGAACAGAG TCAGTTGTTG GGCGTGCGGA TGCGTTCCGA TGGTAAAGAT 
TACTACGCCA TTCGCGCCGC TGACGGTAAA TTCTATGACC GTAACGGTGT TGGCCTGGCG 
AAAGGCTTTT TACGCTTCCC GACCGCAAAA CAGTTCCGCA TCTCCTCCAA CTTCAATCCG 
CGTCGTCTGA ACCCGGTTAC CGGACGCGTT GCGCCGCATC GTGGCGTTGA CTTTGCGATG 
CCGCAGGGTA CGCCGGTGCT GTCGGTGGGG GATGGCGAGG TCGTGGTCGC TAAACGTAGC 
GGCGCTGCCG GTTACTACAT TGCGATTCGT CATGGACGCA CCTACACCAC ACGTTACATG 
CACTTGCGTA AGCTGCTGGT GAAACCGGGG CAAAAAGTGA AACGTGGCGA TCGTATTGCG 
CTTTCTGGTA ACACCGGGCG CTCCACAGGG CCGCATCTGC ATTATGAGGT ATGGATCAAC 
CAGCAAGCCG TTAACCCTCT GACAGCAAAA TTGCCGCGCA CGGAAGGTCT GACGGGGTCA 
GATCGTCGTG AATACCTGGC ACAGGTGAAA GAGGTTCTGC CACAACTGCG CTTCGATTAA
 
Protein sequence
MQQIARSVAL AFNNLPRPHR VMLGSLTVLT LAVAVWRPYV YHPESAPIVK TIELEKSETR 
SLLPEASEPI DQAAQEDEAI PQDELDDKTA GEVGVHEYVV STGDTLSSIL NQYGIDMSDI 
SRLAASDKEL RNLKIGQQLS WTLTADGDLQ RLTWEVSRRE TRTYDRTANG FKMSSEMQQG 
DWVNSLLKGT VGGSFVASAK EAGLTSSEIS AVIKAMQWQM DFRKLKKGDE FSVLMSREML 
DGKREQSQLL GVRMRSDGKD YYAIRAADGK FYDRNGVGLA KGFLRFPTAK QFRISSNFNP 
RRLNPVTGRV APHRGVDFAM PQGTPVLSVG DGEVVVAKRS GAAGYYIAIR HGRTYTTRYM 
HLRKLLVKPG QKVKRGDRIA LSGNTGRSTG PHLHYEVWIN QQAVNPLTAK LPRTEGLTGS 
DRREYLAQVK EVLPQLRFD