Gene SeSA_A2041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A2041 
Symbol 
ID6518531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp1960047 
End bp1960916 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content51% 
IMG OID642747121 
ProductDNA-binding transcriptional regulator HexR 
Protein accessionYP_002114922 
Protein GI194736565 
COG category[K] Transcription 
COG ID[COG1737] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATGC TGGAAAAAGT CCAGTCTCAA CTGGAACATT TAAGCAAATC TGAACGAAAA 
GTCGCCGATG TTATTCTGGC CGCCCCAGGC AGATCGATTC ACTTAAGCAT TGCCATGCTG 
GCCCAGGAAG CTAACGTTAG CGAGCCAACG GTGAACCGTT TCTGTCGCAG CATGAATACC 
CGCGGCTTTC CTGATTTTAA ACTGCATCTG GCGCAAAGTC TGGCAAATGG CACCCCCTAT 
GTTAATCGCA ATGTGGATGA AGATGACAGC GTTGAGGCCT ATACAGGAAA AATCTTCGAG 
TCCGCCATGG CCAGTCTCGA CCATGTTCGT CAGTCGCTGG ATAAATCGGC CGTCAACCGC 
GCCGTCGATT TACTGACCCA GGCAAAAAAA ATCGCCTTTT TTGGCCTTGG TTCCTCCGCC 
GCGGTCGCGC ATGACGCCAT GAATAAGTTT TTTCGCTTCA ATGTGCCGGT GATTTACTCC 
GACGATATCG TGCTGCAACG GATGAGCTGT ATGAATTGTA ACGATGATGA CGTCGTCGTG 
CTCATTTCGC ATACTGGCAG AACCAAGAGC CTGGTGGAAC TGGCGCAGTT GGCGCGGGAA 
AACGATGCGA TGGTGATCGC CCTGACCTCC GCTGGAACGC CGCTGGCGCG CGAAGCCACG 
CTGGCCATTA CCCTCGACGT ACCGGAAGAT ACAGACATTT ATATGCCCAT GGTCTCTCGA 
CTTGCTCAGC TGACCGTGAT AGATGTGCTG GCAACGGGAT TTACTTTGCG TCGCGGGGCA 
AAATTCAGAG ATAACTTGAA GCGTGTCAAG GAAGCGCTCA AGGAATCGCG TTTTGATAAA 
GAATTACTCA TCAGGAGTGA TGACCGCTAA
 
Protein sequence
MNMLEKVQSQ LEHLSKSERK VADVILAAPG RSIHLSIAML AQEANVSEPT VNRFCRSMNT 
RGFPDFKLHL AQSLANGTPY VNRNVDEDDS VEAYTGKIFE SAMASLDHVR QSLDKSAVNR 
AVDLLTQAKK IAFFGLGSSA AVAHDAMNKF FRFNVPVIYS DDIVLQRMSC MNCNDDDVVV 
LISHTGRTKS LVELAQLARE NDAMVIALTS AGTPLAREAT LAITLDVPED TDIYMPMVSR 
LAQLTVIDVL ATGFTLRRGA KFRDNLKRVK EALKESRFDK ELLIRSDDR