Gene SeSA_A1999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1999 
Symbol 
ID6516387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp1930024 
End bp1930602 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content44% 
IMG OID642747087 
Productguanine nucleotide exchange factor SopE 
Protein accessionYP_002114888 
Protein GI194737892 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.595643 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCAGATC GCTTTAGCCT GCATCTGCAA ACAGACATAC CGACTACCCA TTTTCATCGT 
GGGAGCGCCT CTGAGGGGAG GGCAGTATTA ACCAGTAAAA CTGTTAAAGA TTTTATGCTG 
CAAAAGCTCA ATAGCCTGGA TATCAAAGGT AATGCGAGTA AAGATCCGGC CTATGCTCGT 
CAGACATGCG AAGCCATATT AGCAGCCGTG TACAGTAATA ATAAAGATCA ATGTTGTAAA 
TTACTCATCA GTAAAGGGAT CAGTATTACC CCATTTCTGA AAGAGATAGG AGAGGCTGCG 
CAGAATGCGG GGCTACCTGG AGAGATGAAA AACGGCGTAT TTACTCCAGG TGGGGCAGGG 
GCGAATCCTT TTGTCGTCCC CCTCATTGCT GCAGCGAGCA TTAAATATCC GCATATGTTT 
ATAAATCATA ATCAGCAGGT GTCTTTTAAA GCGCATGCTG AGAAAATCGT TATGAAAGAA 
GTTACGCCGC TGTTTAATAA GGGGACGATG CCAACGCCAC AACAATTTCA GTTAACTATA 
GAAAATATTG CGAATAAGTA TCTTCAGAAT GCCTCCTGA
 
Protein sequence
MSDRFSLHLQ TDIPTTHFHR GSASEGRAVL TSKTVKDFML QKLNSLDIKG NASKDPAYAR 
QTCEAILAAV YSNNKDQCCK LLISKGISIT PFLKEIGEAA QNAGLPGEMK NGVFTPGGAG 
ANPFVVPLIA AASIKYPHMF INHNQQVSFK AHAEKIVMKE VTPLFNKGTM PTPQQFQLTI 
ENIANKYLQN AS