Gene SeSA_A1990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1990 
Symbol 
ID6516787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp1921998 
End bp1922495 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content53% 
IMG OID642747078 
ProductGAF domain protein 
Protein accessionYP_002114879 
Protein GI194737152 
COG category[T] Signal transduction mechanisms 
COG ID[COG1956] GAF domain-containing protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.00416581 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAA CAGAACTATA CGCGGCGTTA AACCGCGATT TTCAGTCGTT AATGGCAGGT 
GAAACCAGCT TTCTGGCCAC GCTGGCGAAT ACCAGCGCGT TACTGTTCGA ACGTCTTACC 
GAGGTGAACT GGGCAGGATT TTATCTCCTC GAAGGCGATA CGCTGGTGTT GGGGCCGTTT 
CAGGGGCGAA TCGCCTGTGT GCGGATTCCG GTTGGTCGCG GCGTGTGCGG CGCAGCGGTA 
GCGCAGAATA AGGTTCAACG TATTGATGAT GTTCATGCGT TTGACGGCCA TATTGCCTGT 
GATGCCGCCA GCAACGCCGA AATTGTGCTG CCTGTCACGG TTGGTGAACG GATTATCGGT 
GTGCTGGATA TAGATAGCAC GGCGTTTGGC CGTTTTACCG AAGAAGATGA ACACGGCCTG 
CGTACGCTGG TCGCACAGCT TGAAACCGTG CTTGCAACGA CGGATTACAA AAAATTCTTT 
GCGAGCGTCG CAGGATAA
 
Protein sequence
MSKTELYAAL NRDFQSLMAG ETSFLATLAN TSALLFERLT EVNWAGFYLL EGDTLVLGPF 
QGRIACVRIP VGRGVCGAAV AQNKVQRIDD VHAFDGHIAC DAASNAEIVL PVTVGERIIG 
VLDIDSTAFG RFTEEDEHGL RTLVAQLETV LATTDYKKFF ASVAG