Gene SeSA_A1981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1981 
SymbolcspC 
ID6517273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp1913560 
End bp1913769 
Gene Length210 bp 
Protein Length69 aa 
Translation table11 
GC content47% 
IMG OID642747070 
Productcold shock-like protein CspC 
Protein accessionYP_002114871 
Protein GI194735301 
COG category[K] Transcription 
COG ID[COG1278] Cold shock proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.0000173649 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGA TTAAAGGTCA AGTTAAGTGG TTCAACGAAT CCAAAGGTTT TGGCTTCATT 
ACTCCGGCTG ACGGCAGCAA AGATGTGTTC GTACACTTCT CCGCTATCCA GGGCAATGGT 
TTCAAAACTC TGGCTGAAGG CCAGAACGTT GAGTTCGAAA TTCAGGACGG CCAGAAAGGT 
CCGGCTGCTG TTAACGTAAC AGCTATCTGA
 
Protein sequence
MAKIKGQVKW FNESKGFGFI TPADGSKDVF VHFSAIQGNG FKTLAEGQNV EFEIQDGQKG 
PAAVNVTAI