Gene SeSA_A1975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1975 
SymbolmanZ 
ID6517215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp1908379 
End bp1909230 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content55% 
IMG OID642747065 
ProductPTS system mannose-specific transporter subunit IID 
Protein accessionYP_002114866 
Protein GI194734014 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3716] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 
TIGRFAM ID[TIGR00828] PTS system, mannose/fructose/sorbose family, IID component 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.392737 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGATA TGACTAAAAC TACCACCGAG AAAAAACTCA CTCCGAGCGA TATTCGCGGC 
GTATTTCTTC GTTCTAACCT GTTCCAGGGG TCATGGAACT TCGAACGTAT GCAAGCGCTG
GGCTTCTGCT TCTCTATGGT GCCGGCGATT CGTCGCCTGT ATCCGGAGAA TAATGACGCG
CGTAAACAGG CGATTAAACG TCACCTGGAG TTCTTTAACA CTCATCCTTA CGTTGCGGCG
CCGGTACTGG GCGTGACCCT GGCAATGGAA GAAAAGCGTG CGAACGGCGC AGAGATTGAC
GATGGCGCTA TCAACGGTAT CAAAGTCGGT CTGATGGGAC CGCTGGCAGG CGTCGGCGAC
CCTATCTTCT GGGGTACCGT CCGTCCGGTA TTCGCGGCGC TGGGCGCAGG TATTGCGATG
AGCGGCAGCC TGCTTGGTCC GCTGCTGTTT TTCATCCTGT TTAACCTGGT GCGTCTGGCG
ACCCGTTATT ATGGCGTGGC TTATGGCTAC CGCAAAGGCG TCGATATCGT TAAAGACATG
GGCGGCGGCT TCCTGCAAAA ACTGACTGAG GGGGCGTCAA TCCTCGGCCT GTTTGTCATG
GGGGCATTGG TTAACAAGTG GACGCATGTG AATATCCCGC TGGTGGTCTC CACCATCACC
GGTCAGGATG GTCAGACACG CGTTACCACC GTGCAAACCA TTCTCGACCA GCTGATGCCG
GGGCTGGTTC CGCTACTGTT GACCTTTGCC TGTATGTGGC TGCTGCGTAA GAAAGTTAAC
CCGCTGTGGA TTATCGTGGG CTTCTTCGTC ATCGGTATCG CCGGCTACTC CGTAGGACTG
CTGGGCCAAT AA
 
Protein sequence
MVDMTKTTTE KKLTPSDIRG VFLRSNLFQG SWNFERMQAL GFCFSMVPAI RRLYPENNDA 
RKQAIKRHLE FFNTHPYVAA PVLGVTLAME EKRANGAEID DGAINGIKVG LMGPLAGVGD
PIFWGTVRPV FAALGAGIAM SGSLLGPLLF FILFNLVRLA TRYYGVAYGY RKGVDIVKDM
GGGFLQKLTE GASILGLFVM GALVNKWTHV NIPLVVSTIT GQDGQTRVTT VQTILDQLMP
GLVPLLLTFA CMWLLRKKVN PLWIIVGFFV IGIAGYSVGL LGQ