Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A1975 |
Symbol | manZ |
ID | 6517215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 1908379 |
End bp | 1909230 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642747065 |
Product | PTS system mannose-specific transporter subunit IID |
Protein accession | YP_002114866 |
Protein GI | 194734014 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3716] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID |
TIGRFAM ID | [TIGR00828] PTS system, mannose/fructose/sorbose family, IID component |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.392737 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGATA TGACTAAAAC TACCACCGAG AAAAAACTCA CTCCGAGCGA TATTCGCGGC GTATTTCTTC GTTCTAACCT GTTCCAGGGG TCATGGAACT TCGAACGTAT GCAAGCGCTG GGCTTCTGCT TCTCTATGGT GCCGGCGATT CGTCGCCTGT ATCCGGAGAA TAATGACGCG CGTAAACAGG CGATTAAACG TCACCTGGAG TTCTTTAACA CTCATCCTTA CGTTGCGGCG CCGGTACTGG GCGTGACCCT GGCAATGGAA GAAAAGCGTG CGAACGGCGC AGAGATTGAC GATGGCGCTA TCAACGGTAT CAAAGTCGGT CTGATGGGAC CGCTGGCAGG CGTCGGCGAC CCTATCTTCT GGGGTACCGT CCGTCCGGTA TTCGCGGCGC TGGGCGCAGG TATTGCGATG AGCGGCAGCC TGCTTGGTCC GCTGCTGTTT TTCATCCTGT TTAACCTGGT GCGTCTGGCG ACCCGTTATT ATGGCGTGGC TTATGGCTAC CGCAAAGGCG TCGATATCGT TAAAGACATG GGCGGCGGCT TCCTGCAAAA ACTGACTGAG GGGGCGTCAA TCCTCGGCCT GTTTGTCATG GGGGCATTGG TTAACAAGTG GACGCATGTG AATATCCCGC TGGTGGTCTC CACCATCACC GGTCAGGATG GTCAGACACG CGTTACCACC GTGCAAACCA TTCTCGACCA GCTGATGCCG GGGCTGGTTC CGCTACTGTT GACCTTTGCC TGTATGTGGC TGCTGCGTAA GAAAGTTAAC CCGCTGTGGA TTATCGTGGG CTTCTTCGTC ATCGGTATCG CCGGCTACTC CGTAGGACTG CTGGGCCAAT AA
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Protein sequence | MVDMTKTTTE KKLTPSDIRG VFLRSNLFQG SWNFERMQAL GFCFSMVPAI RRLYPENNDA RKQAIKRHLE FFNTHPYVAA PVLGVTLAME EKRANGAEID DGAINGIKVG LMGPLAGVGD PIFWGTVRPV FAALGAGIAM SGSLLGPLLF FILFNLVRLA TRYYGVAYGY RKGVDIVKDM GGGFLQKLTE GASILGLFVM GALVNKWTHV NIPLVVSTIT GQDGQTRVTT VQTILDQLMP GLVPLLLTFA CMWLLRKKVN PLWIIVGFFV IGIAGYSVGL LGQ
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