Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A1973 |
Symbol | manX |
ID | 6515873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 1906545 |
End bp | 1907513 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642747063 |
Product | PTS system, mannose-specific IIAB component |
Protein accession | YP_002114864 |
Protein GI | 194738274 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2893] Phosphotransferase system, mannose/fructose-specific component IIA [COG3444] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB |
TIGRFAM ID | [TIGR00824] PTS system, mannose/fructose/sorbose family, IIA component [TIGR00854] PTS system, mannose/fructose/sorbose family, IIB component |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00730165 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACCATTG CTATTGTTAT AGGCACACAT GGTTGGGCTG CAGAGCAGTT ACTTAAAACA GCCGAAATGC TGTTAGGCGA GCAGGAAAAC GTCGGCTGGA TCGATTTCGT TCCAGGCGAA AATGCCGAAA CGCTGATCGA AAAGTACAAC GCTCAGTTGG CTAAACTCGA TACCAGTAAA GGCGTGCTAT TTCTCGTTGA TACATGGGGA GGCAGTCCGT TTAATGCTGC CAGCCGCATT GTCGTCGATA AAGAGCGCTA TGAAGTTATT GCCGGCGTCA ACATCCCGAT GCTGGTCGAA ACGTTTATGG CTCGTGACGA CGATCCGAGC TTTGACGAGC TGGTCGCACT GGCGGTAGAA ACCGGTCGTG AAGGCGTAAA AGCGCTGAAA GCGAAACCGG TAGAAAAAGC CGCGCCAGCG CCAGTCGCCG CCGCGCCAAA AGCGGCCACG CCGGCAAAAC CGATGGGCCC GAATGATTAT ATGGTTATCG GGCTTGCCCG TATTGATGAC CGCCTCATTC ACGGTCAGGT CGCTACCCGC TGGACCAAAG AGACCAATGT CAGCCGTATT ATTGTTGTGA GCGATGAAGT CGCGGCGGAT ACCGTACGTA AAACGCTGCT GACGCAAGTT GCGCCGCCGG GCGTTACGGC GCATGTGGTT GACGTCGCGA AGATGATTCG CGTCTACAAT AACCCGAAAT ACGCCGGTGA ACGCGTGATG CTTCTGTTTA CCAATCCTAC CGACGTCGAG CGCATCGTTG AGGGCGGCGT GAAAGTCACT TCCGTGAACA TTGGCGGTAT GGCCTATCGT CAAGGTAAAA CGCAGGTGAA CAACGCCGTT TCCGTCGATG AAAAGGATAT CGAAGCCTTT AAAAAGCTCA ACGAGCGCGG CATCGAGCTT GAGGTGCGTA AAGTTTCCAC CGATCCGAAA CTGAAAATGA TGGATTTAAT TGCCAAAGTG GCGAAATAA
|
Protein sequence | MTIAIVIGTH GWAAEQLLKT AEMLLGEQEN VGWIDFVPGE NAETLIEKYN AQLAKLDTSK GVLFLVDTWG GSPFNAASRI VVDKERYEVI AGVNIPMLVE TFMARDDDPS FDELVALAVE TGREGVKALK AKPVEKAAPA PVAAAPKAAT PAKPMGPNDY MVIGLARIDD RLIHGQVATR WTKETNVSRI IVVSDEVAAD TVRKTLLTQV APPGVTAHVV DVAKMIRVYN NPKYAGERVM LLFTNPTDVE RIVEGGVKVT SVNIGGMAYR QGKTQVNNAV SVDEKDIEAF KKLNERGIEL EVRKVSTDPK LKMMDLIAKV AK
|
| |