Gene SeSA_A1973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1973 
SymbolmanX 
ID6515873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp1906545 
End bp1907513 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content53% 
IMG OID642747063 
ProductPTS system, mannose-specific IIAB component 
Protein accessionYP_002114864 
Protein GI194738274 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2893] Phosphotransferase system, mannose/fructose-specific component IIA
[COG3444] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 
TIGRFAM ID[TIGR00824] PTS system, mannose/fructose/sorbose family, IIA component
[TIGR00854] PTS system, mannose/fructose/sorbose family, IIB component 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00730165 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCATTG CTATTGTTAT AGGCACACAT GGTTGGGCTG CAGAGCAGTT ACTTAAAACA 
GCCGAAATGC TGTTAGGCGA GCAGGAAAAC GTCGGCTGGA TCGATTTCGT TCCAGGCGAA
AATGCCGAAA CGCTGATCGA AAAGTACAAC GCTCAGTTGG CTAAACTCGA TACCAGTAAA
GGCGTGCTAT TTCTCGTTGA TACATGGGGA GGCAGTCCGT TTAATGCTGC CAGCCGCATT
GTCGTCGATA AAGAGCGCTA TGAAGTTATT GCCGGCGTCA ACATCCCGAT GCTGGTCGAA
ACGTTTATGG CTCGTGACGA CGATCCGAGC TTTGACGAGC TGGTCGCACT GGCGGTAGAA
ACCGGTCGTG AAGGCGTAAA AGCGCTGAAA GCGAAACCGG TAGAAAAAGC CGCGCCAGCG
CCAGTCGCCG CCGCGCCAAA AGCGGCCACG CCGGCAAAAC CGATGGGCCC GAATGATTAT
ATGGTTATCG GGCTTGCCCG TATTGATGAC CGCCTCATTC ACGGTCAGGT CGCTACCCGC
TGGACCAAAG AGACCAATGT CAGCCGTATT ATTGTTGTGA GCGATGAAGT CGCGGCGGAT
ACCGTACGTA AAACGCTGCT GACGCAAGTT GCGCCGCCGG GCGTTACGGC GCATGTGGTT
GACGTCGCGA AGATGATTCG CGTCTACAAT AACCCGAAAT ACGCCGGTGA ACGCGTGATG
CTTCTGTTTA CCAATCCTAC CGACGTCGAG CGCATCGTTG AGGGCGGCGT GAAAGTCACT
TCCGTGAACA TTGGCGGTAT GGCCTATCGT CAAGGTAAAA CGCAGGTGAA CAACGCCGTT
TCCGTCGATG AAAAGGATAT CGAAGCCTTT AAAAAGCTCA ACGAGCGCGG CATCGAGCTT
GAGGTGCGTA AAGTTTCCAC CGATCCGAAA CTGAAAATGA TGGATTTAAT TGCCAAAGTG
GCGAAATAA
 
Protein sequence
MTIAIVIGTH GWAAEQLLKT AEMLLGEQEN VGWIDFVPGE NAETLIEKYN AQLAKLDTSK 
GVLFLVDTWG GSPFNAASRI VVDKERYEVI AGVNIPMLVE TFMARDDDPS FDELVALAVE
TGREGVKALK AKPVEKAAPA PVAAAPKAAT PAKPMGPNDY MVIGLARIDD RLIHGQVATR
WTKETNVSRI IVVSDEVAAD TVRKTLLTQV APPGVTAHVV DVAKMIRVYN NPKYAGERVM
LLFTNPTDVE RIVEGGVKVT SVNIGGMAYR QGKTQVNNAV SVDEKDIEAF KKLNERGIEL
EVRKVSTDPK LKMMDLIAKV AK