Gene SeSA_A1965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1965 
Symbol 
ID6518373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp1896526 
End bp1898436 
Gene Length1911 bp 
Protein Length636 aa 
Translation table11 
GC content56% 
IMG OID642747055 
Producthypothetical protein 
Protein accessionYP_002114856 
Protein GI194737379 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG1199] Rad3-related DNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGACG ATTTTGCAGC AGATGGCCAA CTGGCCAAAG CGATAACCGG TTTTAAACCG 
CGCGAACCAC AGCGACAAAT GGCGGTTGCC GTAACACAAG CGATTGAAAA TGCGCAGCCT
CTGGTTGTTG AAGCCGGCAC CGGAACCGGG AAGACCTATG CTTACCTCGC TCCGGCGTTG
CGCGCCGGGA AAAAAGTTAT TATTTCGACC GGGTCGAAAG CGTTGCAGGA TCAACTCTAC
AGCCGCGATC TGCCGACGGT AGCAAAAGCG TTGGCGTTTA CCGGTAAGAC GGCCCTGTTG
AAAGGACGTT CAAACTACCT CTGCCTGGAG CGTCTGGAAC AACAAGCGCT GGCGGGCGGC
GATTTACCGG TACAAACGTT AAGCGACGTG ATATTGCTGC GCTCCTGGTC AAATCAGACG
CGGGATGGCG ATATCAGCAC CTGCGTCAGC GTGGCGGAAG ATTCCCAGGC CTGGCCGCTG
GTCACCAGTA CCAACGACAA CTGCCTTGGC AGCGATTGCC CGCTCTATAA AGAGTGCTTT
GTGGTGAAAG CGCGTAAAAA GGCGATGGAC GCGGATGTGG TGATTGTAAA CCACCACCTT
TTTCTTGCGG ATATGGTGGT TAAAGAGAGC GGGTTTGGCG AACTTATCCC TCAGGCTGAA
GTAATGATCT TCGATGAAGC CCACCAACTG CCTGACATCG CCAGCCAGTA TTTCGGACAA
TCGCTCTCCA GCCGTCAGTT GCTGGATTTA GCAAAAGACA TCACCATCGC CTACCGGACG
GAACTGAAAG ACACTCAACA GTTGCAAAAA TGCGCCGATC GCCTTGCCCA GAGCGCCCAG
GATTTTCGTC TGCAACTGGG GGAGCCCGGC TACCGGGGAA ATTTGCGTGA ATTGTTAGCC
GACTCACGTA TCCAACGGGC ATTTTTACTG CTGGATGATA CGCTGGAGCT TTGTTACGAC
GTGGCAAAGC TGTCGCTGGG CCGTTCGGCG CTGCTGGATG CGGCTTTTGA ACGCGCCACG
CTATACCGTT CACGGCTGAA ACGCTTAAAA GAGATCAATC AGCCGGGATA CAGCTACTGG
TATGAGTGCA CCTCGCGCCA TTTCACCCTG GCGCTGACGC CGCTCACCGT GGCGGATAAA
TTCAAAGAGG TGATGGAACA GAAGCCCGGT AGCTGGATTT TTACCTCGGC CACGTTGTCG
GTAAATGATG ATCTTCACCA CTTTACCGCC CGTCTGGGAA TTGAACAGGC AGAATCCATG
CTGCTGCCCA GCCCATTCGA CTATACGCGC CAGGCGTTAC TCTGCGTACC GCGTAACCTA
CCGCAAACCA ACCAGCCCGG CGCGGCGCGA CAGTTGGCGG CTATGCTCAG GCCGATTATC
GAAGCCAATA ACGGGCGATG TTTTATGCTG TGCACCTCAC ACGCCATGAT GCGCGATCTG
GCGGAGCAGT TTCGCGCCAC CATGACGCTG CCAGTGTTGT TGCAAGGGGA AACCAGTAAA
GGCCAACTGT TACAGCAATT TGTTAGCGCC GGCAACGCGC TGCTCGTCGC CACCAGCAGC
TTCTGGGAAG GGGTGGACGT GCGCGGCGAT ACGTTATCGT TGGTGATTAT CGACAAATTG
CCGTTTACCT CCCCGGACGA CCCGCTGTTA AAAGCGCGAA TGGAAGACTG TCGTTTGCGC
GGCGGCGATC CGTTTGATGA GGTTCAACTG CCCGACGCGG TGATTACACT GAAGCAGGGG
GTGGGGCGGC TGATTCGCGA TGCGGACGAT CGCGGGGTGT TAGTGATTTG TGATAACCGG
CTGGTGATGC GGCCCTATGG CGCCACGTTT CTCGCCAGCC TGCCTCCTGC GCCGCGCACG
CGTGATATCG CCCGTGCCGT TCGCTTTCTT GCGATTCCAT CCGCCGAGTA A
 
Protein sequence
MTDDFAADGQ LAKAITGFKP REPQRQMAVA VTQAIENAQP LVVEAGTGTG KTYAYLAPAL 
RAGKKVIIST GSKALQDQLY SRDLPTVAKA LAFTGKTALL KGRSNYLCLE RLEQQALAGG
DLPVQTLSDV ILLRSWSNQT RDGDISTCVS VAEDSQAWPL VTSTNDNCLG SDCPLYKECF
VVKARKKAMD ADVVIVNHHL FLADMVVKES GFGELIPQAE VMIFDEAHQL PDIASQYFGQ
SLSSRQLLDL AKDITIAYRT ELKDTQQLQK CADRLAQSAQ DFRLQLGEPG YRGNLRELLA
DSRIQRAFLL LDDTLELCYD VAKLSLGRSA LLDAAFERAT LYRSRLKRLK EINQPGYSYW
YECTSRHFTL ALTPLTVADK FKEVMEQKPG SWIFTSATLS VNDDLHHFTA RLGIEQAESM
LLPSPFDYTR QALLCVPRNL PQTNQPGAAR QLAAMLRPII EANNGRCFML CTSHAMMRDL
AEQFRATMTL PVLLQGETSK GQLLQQFVSA GNALLVATSS FWEGVDVRGD TLSLVIIDKL
PFTSPDDPLL KARMEDCRLR GGDPFDEVQL PDAVITLKQG VGRLIRDADD RGVLVICDNR
LVMRPYGATF LASLPPAPRT RDIARAVRFL AIPSAE