| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A1948 |
|---|
| Symbol | nhaB |
|---|
| ID | 6517295 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | + |
|---|
| Start bp | 1884835 |
|---|
| End bp | 1886379 |
|---|
| Gene Length | 1545 bp |
|---|
| Protein Length | 514 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642747039 |
|---|
| Product | sodium/proton antiporter |
|---|
| Protein accession | YP_002114840 |
|---|
| Protein GI | 194733981 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3067] Na+/H+ antiporter |
|---|
| TIGRFAM ID | [TIGR00774] Na+/H+ antiporter NhaB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.696953 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGATCT CATGGGGTCG CGCCATGTGG CGCAACTTTT TAGGCCAGTC GCCCGACTGG
TACAAACTGG CACTACTTGT CTTTTTAATT ATTAACCCAT TCATTTTCTT AGCTAATCCC
TTTATTGCCG GTTGGCTGCT GGTGGCAGAG TTTATCTTCA CCCTGGCGAT GGCGTTAAAG
TGTTACCCCC TGCTGCCCGG CGGGTTACTG GCCATTGAAG CCGTCATCAT CGGCATGACC
AGCGCCGCCC ATGTACGTGA AGAGGTTGCC GCCAACCTGG AAGTCTTGCT GCTGCTGATG
TTTATGGTGG CAGGCATCTA CTTTATGAAG CAGTTATTGC TGTTTATTTT TACCCGTCTG
TTACTCAGTA TCCGCTCGAA GATGGTTCTG TCGCTGGCCT TTTGCGTCGC CGCCGCGTTC
TTGTCGGCTT TTCTTGACGC GCTTACCGTC GTTGCGGTGG TGATCAGCGT CGCCGTCGGT
TTTTACGGGA TTTACCATCG TGTGGCCTCA TCGCGCGGCG AAGAGAACGA TATGCTGGAC
GATAGCCATA TCGATCCGCA TTACAAAACG GTGCTGGAGC AATTCCGCGG ATTCTTGCGT
AGTCTGATGA TGCATGCAGG CGTGGGGACG GCGCTGGGCG GCGTCATGAC CATGGTCGGG
GAGCCGCAAA ACCTGATCAT CGCTAAAGCG GCTGGCTGGC ATTTCGGCGA CTTCTTTTTA
CGGATGTCGC CTGTCACCGT CCCGGTACTG ATATGTGGAC TGTTAACCTG TATGCTGGTC
GAGAAAATGC GCTGGTTTGG CTATGGCGAA ACGTTGCCCG AAAAAGTCCG CGACGTCTTG
CAGCAATTCG ACGATCAAAG CCGTAAGAAG CGCACCCGCC AGGATAAACT TAAACTAATA
GTCCAGGCAA TTATTGGCGT CTGGCTGGTT ACCGCCCTCG CCCTCCATCT CGCGGAGGTG
GGGCTGATTG GTCTGTCGGT TATTATTCTG GCCACCGCGT TAACGGGTGT AACCGATGAA
CACGCCATCG GCAAAGCGTT TACCGAGTCG CTGCCGTTTA CTGCGCTGTT AACCGTTTTC
TTCTCCATTG TGGCGGTTAT TATCGATCAA CATCTTTTCG CGCCGATTAT TCAGTTTGTC
TTGCAAGCCT CTGAACACGC GCAGCTAACG CTGTTCTATC TCTTTAACGG CCTGTTGTCT
TCCATCTCGG ATAACGTCTT TGTCGGCACC ATTTATATCA ACGAAGCGAA GGCGGCAATG
GAAAACGGCG CTATCAGCTT AAAACAGTTT GAGCTGTTAG CCGTGGCCAT CAATACCGGT
ACTAACCTGC CATCGGTAGC GACGCCAAAT GGTCAGGCGG CATTCTTATT CCTGCTGACC
TCCGCGCTGG CGCCGTTAAT CCGTCTCTCT TATGGCCGTA TGGTCTGGAT GGCGTTACCG
TACACTATCG TACTGACCCT GATAGGGCTA CTGTGCGTCG AATTCACTCT TGCGCCGGTC
ACCGAATGGA TGACTCAGGC AGGATGGTTA GCAACGCTTT CGTAA
|
|---|
| Protein sequence | MEISWGRAMW RNFLGQSPDW YKLALLVFLI INPFIFLANP FIAGWLLVAE FIFTLAMALK
CYPLLPGGLL AIEAVIIGMT SAAHVREEVA ANLEVLLLLM FMVAGIYFMK QLLLFIFTRL
LLSIRSKMVL SLAFCVAAAF LSAFLDALTV VAVVISVAVG FYGIYHRVAS SRGEENDMLD
DSHIDPHYKT VLEQFRGFLR SLMMHAGVGT ALGGVMTMVG EPQNLIIAKA AGWHFGDFFL
RMSPVTVPVL ICGLLTCMLV EKMRWFGYGE TLPEKVRDVL QQFDDQSRKK RTRQDKLKLI
VQAIIGVWLV TALALHLAEV GLIGLSVIIL ATALTGVTDE HAIGKAFTES LPFTALLTVF
FSIVAVIIDQ HLFAPIIQFV LQASEHAQLT LFYLFNGLLS SISDNVFVGT IYINEAKAAM
ENGAISLKQF ELLAVAINTG TNLPSVATPN GQAAFLFLLT SALAPLIRLS YGRMVWMALP
YTIVLTLIGL LCVEFTLAPV TEWMTQAGWL ATLS
|
|---|
| |