Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A1947 |
Symbol | fadR |
ID | 6516772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 1883896 |
End bp | 1884615 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642747038 |
Product | fatty acid metabolism regulator |
Protein accession | YP_002114839 |
Protein GI | 194735892 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | [TIGR02812] fatty acid metabolism transcriptional regulator FadR |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0438592 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCATTA AGGCGCAGAG CCCGGCGGGT TTCGCGGAAG AGTATATTAT TGAAAGTATC TGGAATAACC GCTTTCCTCC TGGCACTATC TTACCGGCAG AACGAGAACT CTCCGAACTG ATCGGCGTGA CGCGCACGAC ATTACGCGAG GTGTTACAGC GGTTGGCGCG AGATGGCTGG CTGACCATTC AGCATGGCAA ACCGACAAAG GTTAATAATT TTTGGGAAAC GTCAGGGCTG AATATCCTTG AAACGCTGGC CCGCCTTGAT CATGAAAGCG TTCCGCAACT GATCGACAAT TTGTTGTCGG TGCGTACCAA TATTTCTACT ATCTTTATTC GTACCGCGTT GCGTCAACAC CCGGATAAGG CGCAGGAAGT GCTGGCCACA GCCCACGAAG TGGCCGACCA TGCCGATGCA TTCGCCGATC TGGACTATAA CATCTTTCGT GGTCTGGCAT TCGCCTCCGG CAATCCTATT TACGGCTTGA TCCTGAACGG CATGAAAGGG TTATACACCC GCATTGGTCG CCACTATTTC GCCAATCCGG AAGCGCGCAG TCTGGCACTG GGTTTCTATC ATAAATTATC GTCGTTATGC GAGCAGGGCG CGCACGACCA GGTGTATGAA ACGGTGCGGC GTTACGGGCA TGACAGCGGC GAGATTTGGC ATCGGATGCA GAAAAATCTG CCCGGCGATT TAGCGATTCA GGGACGATAA
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Protein sequence | MVIKAQSPAG FAEEYIIESI WNNRFPPGTI LPAERELSEL IGVTRTTLRE VLQRLARDGW LTIQHGKPTK VNNFWETSGL NILETLARLD HESVPQLIDN LLSVRTNIST IFIRTALRQH PDKAQEVLAT AHEVADHADA FADLDYNIFR GLAFASGNPI YGLILNGMKG LYTRIGRHYF ANPEARSLAL GFYHKLSSLC EQGAHDQVYE TVRRYGHDSG EIWHRMQKNL PGDLAIQGR
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