Gene SeSA_A1940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1940 
Symbol 
ID6519680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp1875275 
End bp1876009 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content53% 
IMG OID642747032 
ProductYcgR family protein 
Protein accessionYP_002114833 
Protein GI194738062 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5581] Predicted glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.426731 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGGTT ACAATGAGCA GTTCCTGAAA AAAAATCCAT TAGCGATATT AGGCGTGCTA 
CGGGATTTAA ATAAAAATCA GGTTCCACTG CGTATTTCAT GGGCGCATGG TCAATTCATC 
AGTAAAATTT TGGCGGTAGA CCCGGAAAAA CTCATCGTAG ATTACGGCAG CCAGGAATAT 
GAAAATAGCG CCGTATTACG TGCCGGGCAG GTAGCCATTA TCGCAGAAAC GCAGGGCGCA 
AAAGTCGAGT TCACGTTGCC GCAACTCGTT ACAGGCGAAT ATCAGCGGCT GCCGGCCTTT 
ATCACGCCCC TGCCGTCGTC ACTGTGGTTT GTCCAGCGCC GGGAGTATTT TCGCATTGGC 
GCGCCGCTGT ATCCGCCTTA TTACGGCGTC ACCACGCTAC CGGACACCCG TACGTTACGT 
TTTCGCCTGT TTGATCTTTC CCTGGGCGGC ATGGGCGCGC TACTGGAATC CGCCATCCCC 
GACGGACTAA TCGAAGGCGC ACGCTTTTCG CAGGTTGAAC TGAACATGGG GCCATGGGGG 
ATTTTTCACG TTGACGCCCA GCTTATCGCC ATCAGCGAGC GTAAGGTGAT TGATGGGAAA 
AATGAAACGA TCACCACTCC CCGCCTGAGC TTTCGTTTCC TTAACGTTAG CCCGGCGGTG 
GAGCGGGAGT TGCAGCGGAT TATTTTTTCG CTTGAGCGCG ACGCCCGAGA AAGAGCGAAT 
AAAGTGCGAG AATAA
 
Protein sequence
MSGYNEQFLK KNPLAILGVL RDLNKNQVPL RISWAHGQFI SKILAVDPEK LIVDYGSQEY 
ENSAVLRAGQ VAIIAETQGA KVEFTLPQLV TGEYQRLPAF ITPLPSSLWF VQRREYFRIG 
APLYPPYYGV TTLPDTRTLR FRLFDLSLGG MGALLESAIP DGLIEGARFS QVELNMGPWG 
IFHVDAQLIA ISERKVIDGK NETITTPRLS FRFLNVSPAV ERELQRIIFS LERDARERAN 
KVRE