Gene SeSA_A1908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1908 
Symbol 
ID6518685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp1845278 
End bp1846378 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content50% 
IMG OID642747000 
Productcalcium/sodium:proton antiporter 
Protein accessionYP_002114801 
Protein GI194737722 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0387] Ca2+/H+ antiporter 
TIGRFAM ID[TIGR00378] calcium/proton exchanger (cax)
[TIGR00846] calcium/proton exchanger 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACATG CCTGTGAGGC GGTGAAAACC CGCCATAAGG AGACTTCGCT TATTTTCCCG 
GTTCTTGCGC TGGTAGTGCT GTTCCTTTGG GGAAGCAGCC AGTCACTACC AGTGGTTATT
GGCATCAATA TCCTTGCACT TATTGGTATT TTAAGCAGCG CATTTAGCGT GGTCCGTCAT
GCCGATGTAT TAGCGCACCG ACTCGGCGAA CCCTACGGAT CGCTTATTTT AAGCCTGTCC
GTCGTTATTC TTGAAGTGAG TTTAATTTCA GCGCTGATGG CCACCGGCGA TGCTGCGCCA
ACGCTTATGC GTGATACGCT CTACTCTATT ATTATGATTG TCACCGGGGG ACTGGTCGGT
TTCTCGTTGT TGTTGGGCGG GCGTAAATTC GCAACGCAAT ATATGAATTT ATTCGGGATT
AAGCAGTATC TTATCGCGCT GTTTCCGCTG GCGATTATTG TGCTGGTTTT TCCCATGGCA
TTGCCGCAAG CTAATTTCTC TACCGGTCAG GCATTATTGG TCGCGTTAAT TTCTGCCGCG
ATGTACGGCG TATTTTTGTT GATTCAAACC AAAACGCACC AGAGCTTATT TATCTATGAA
CATGAAGATG AAGGCGATGA TGACAATCCA CACCACGGTA AACCCTCCGC GCACAGTAGC
GGCTGGCATA CGGTCTGGTT ACTCATTCAT TTAATTGCGG TCATTGCCGT TACCAAAATG
AATGCCAGCC CGCTGGAGGC GTTGCTGACC AGCATGAACG CCCCGGTCGC CTTTACCGGT
TTCCTGGTCG CGTTGTTAAT TCTCTCGCCG GAAGGACTGG GAGCGCTGAA GGCAGTACTG
AATAATCAGG TTCAGCGGGC AATGAATCTG TTCTTCGGAT CGGTGTTGGC GACGATTTCA
TTAACCGTGC CGGTCGTCAC GCTCATCGCC TGGGCGACAG GTAATGATCT GGTGTTTGGT
TTAGGCGCGC CGGAAATGGT AGTGATGGTG GCCTCGTTAG TGCTGTGCCA TATTTCGTTC
TCTACCGGAC GCACCAACGT GCTAAACGGC GCGGCGCATC TGGCTTTATT TGCCGCCTAT
CTGATGACGA TTTTTGCCTG A
 
Protein sequence
MTHACEAVKT RHKETSLIFP VLALVVLFLW GSSQSLPVVI GINILALIGI LSSAFSVVRH 
ADVLAHRLGE PYGSLILSLS VVILEVSLIS ALMATGDAAP TLMRDTLYSI IMIVTGGLVG
FSLLLGGRKF ATQYMNLFGI KQYLIALFPL AIIVLVFPMA LPQANFSTGQ ALLVALISAA
MYGVFLLIQT KTHQSLFIYE HEDEGDDDNP HHGKPSAHSS GWHTVWLLIH LIAVIAVTKM
NASPLEALLT SMNAPVAFTG FLVALLILSP EGLGALKAVL NNQVQRAMNL FFGSVLATIS
LTVPVVTLIA WATGNDLVFG LGAPEMVVMV ASLVLCHISF STGRTNVLNG AAHLALFAAY
LMTIFA