Gene SeSA_A1886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1886 
Symbol 
ID6517106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp1826325 
End bp1827338 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content51% 
IMG OID642746981 
Productresponse regulator of RpoS 
Protein accessionYP_002114784 
Protein GI194735294 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0489347 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.205124 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGC CATTGGTCGG AAAACAGATT CTTATTGTTG AAGACGAGCC TGTATTTCGC 
TCGCTTCTGG ATTCGTGGTT TTCCTCTTTG GGAGCGACAA CGGCATTGGC AGGCGACGGG
GTGGATGCCC TGGAGTTGAT GGGGCGTTTT ACCCCTGATC TCATGATATG TGATATCGCT
ATGCCGAGAA TGAACGGTCT CAAACTGGTA GAAAACTTAC GTAATCGCGG AGACCAGACG
CCTATTCTGG TTATTTCCGC AACAGAAAAT ATGGCGGATA TCGCCAAAGC GTTACGCCTT
GGGGTTGAAG ATGTCTTGCT GAAGCCGGTA AAAGATCTCA ACCGCTTGCG GGAAACCGTA
TTCGCTTGCT TATACCCTAA TATGTTTAAC TCGCGGGTTG AAGAAGAAGA ACGCCTGTTT
CGTGACTGGG ATGCAATGGT GAGTAATCCG ACCGCCGCAG CGCAATTGTT GCAGGAATTG
CAGCCCCCGG TACAGCAGGT GATTTCTCAT TGCCGCATTA ATTACCGGCA GCTCGTCTCC
GCCGATCAGC CTGGACTGGT GCTGGATATT GCGCCGCTAT CTGATAACGA ACTGGCATTT
TATTGCCTGG ATGTCACCCG GGCGGGCGAT AACGGCGTGT TAGCCGCATT GTTGCTGCGA
GCGCTATTTA ACGGCTTATT GCAGGATCAG CTCGGCCAAC AAAAGCACCG TTTACCGGAG
TTAGGCGCGC TATTAAAACA GGTAAATCAT CTGCTCAGAC AAGCCAATTT ACCTGGGCAA
TTCCCGCTAT TTGTCGGCTA CTATCACAGT GAGCTCAAAA ATTTGATTCT CGTCTCCGCC
GGATTGAACG CCACCTTAAA TACGGGCGCT CATCAGGTTC AAATTAGCAG CGGCGTGCCG
CTAGGAACAT TGGGTAACGC CTACCTTAAC CAATTAAGCC AGCGTTGCGA CTCATGGCAG
TGTCAAATAT GGGGCGCAGG AGGGCGTCTG CGATTGATGT TGTCTGCGGA ATGA
 
Protein sequence
MTQPLVGKQI LIVEDEPVFR SLLDSWFSSL GATTALAGDG VDALELMGRF TPDLMICDIA 
MPRMNGLKLV ENLRNRGDQT PILVISATEN MADIAKALRL GVEDVLLKPV KDLNRLRETV
FACLYPNMFN SRVEEEERLF RDWDAMVSNP TAAAQLLQEL QPPVQQVISH CRINYRQLVS
ADQPGLVLDI APLSDNELAF YCLDVTRAGD NGVLAALLLR ALFNGLLQDQ LGQQKHRLPE
LGALLKQVNH LLRQANLPGQ FPLFVGYYHS ELKNLILVSA GLNATLNTGA HQVQISSGVP
LGTLGNAYLN QLSQRCDSWQ CQIWGAGGRL RLMLSAE