Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A1879 |
Symbol | oppB |
ID | 6517946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 1815953 |
End bp | 1816873 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642746974 |
Product | oligopeptide transporter permease |
Protein accession | YP_002114777 |
Protein GI | 194737110 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.675854 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGAAAT TTATTTTACG CCGCTGTCTG GAAGCGATTC CGACGCTGTT TATTCTTATT ACCATCTCTT TCTTTATGAT GCGCCTCGCG CCGGGGAGTC CTTTTACCGG CGAGCGCGCA TTGCCGCCGG AAGTGCTGGC CAATATTGAA GCAAAATATC ATCTGAACGA TCCTATCATG ACGCAGTACT TCAGCTACCT GAGGCAGCTG GCGCATGGCG ATTTTGGACC ATCGTTTAAA TACAAAGATT ACACGGTCAA CGATCTGGTT GCCGCCAGCT TCCCCGTTTC GGCGAAACTT GGCGCCGCCG CTTTTTTACT GGCGGTCATT ATTGGTGTCA GCGCTGGCGT GATTGCCGCG CTAAAGCAAA ATACGCGATG GGATTATACG GTGATGGGAT TTGCCATGAC CGGCGTCGTT ATCCCCAGTT TTGTGGTAGC GCCGCTACTG GTGATGGTCT TTGCGATAAC CTTGCAATGG CTGCCTGGCG GCGGCTGGAA CGGCGGGGCG TTAAAATTTA TGATCCTGCC GATGGTCGCG CTTTCACTGG CCTATATTGC CAGCATCGCT CGTATTACGC GCGGCTCAAT GATTGAAGTT CTGCATTCGA ACTTTATTCG TACCGCGCGG GCAAAAGGAT TACCGATGCG CAGAATCATC TTCCGCCATG CGTTAAAACC TGCGCTGCTG CCGGTTTTAT CCTATATGGG GCCAGCCTTT GTCGGCATTA TTACCGGCTC AATGGTGATT GAAACGATTT ATGGCTTACC GGGCATTGGG CAGCTTTTCG TTAATGGCGC GCTCAACCGC GATTACTCGC TGGTGTTAAG TTTGACCATT TTAGTCGGGG CTCTGACCAT ATTGTTTAAC GCCATTGTCG ATGTGCTCTA TGCCGTTATC GACCCGAAAA TTCGCTATTG A
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Protein sequence | MLKFILRRCL EAIPTLFILI TISFFMMRLA PGSPFTGERA LPPEVLANIE AKYHLNDPIM TQYFSYLRQL AHGDFGPSFK YKDYTVNDLV AASFPVSAKL GAAAFLLAVI IGVSAGVIAA LKQNTRWDYT VMGFAMTGVV IPSFVVAPLL VMVFAITLQW LPGGGWNGGA LKFMILPMVA LSLAYIASIA RITRGSMIEV LHSNFIRTAR AKGLPMRRII FRHALKPALL PVLSYMGPAF VGIITGSMVI ETIYGLPGIG QLFVNGALNR DYSLVLSLTI LVGALTILFN AIVDVLYAVI DPKIRY
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