Gene SeSA_A1877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1877 
SymboloppD 
ID6519247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp1814011 
End bp1815018 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content52% 
IMG OID642746972 
Productoligopeptide transporter ATP-binding component 
Protein accessionYP_002114775 
Protein GI194738295 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.427719 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.670538 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTAT CAGAAACCGC AACTCAGGCG CCGCAACCGG CGAATGTACT GCTGGAGGTA 
AATGATCTTC GTGTTACGTT CGCTACGCCT GATGGCGATG TGACGGCGGT CAACGATCTG
AACTTTACGC TTCGCGCTGG AGAAACGTTA GGCATTGTTG GCGAGTCTGG ATCGGGGAAA
TCGCAAACGG CGTTCGCATT AATGGGACTG CTGGCGACGA ATGGTCGAAT CGGCGGTTCC
GCGACCTTTA ACGGACGTGA AATTCTTAAT CTACCTGAGC GCGAACTGAA TACGCTGCGC
GCAGAACAGA TTTCGATGAT TTTTCAGGAC CCGATGACCT CGCTAAATCC TTATATGCGC
GTTGGGGAGC AGTTAATGGA AGTCCTGATG CTGCATAAAG GGATGAGCAA AGCGGAAGCT
TTTGAAGAGT CCGTCAGAAT GCTGGATGCC GTAAAAATGC CGGAAGCGCG CAAACGGATG
AAAATGTACC CGCACGAATT TTCCGGCGGA ATGCGTCAAC GTGTGATGAT TGCGATGGCG
CTGTTGTGCA GGCCGAAACT GCTTATTGCC GATGAGCCTA CCACCGCGCT TGATGTTACC
GTGCAGGCGC AGATTATGAC CTTGCTTAAT GAGCTAAAGC GCGAATTTAA TACCGCCATT
ATCATGATTA CCCACGATCT GGGTGTGGTC GCGGGTATTT GCGATAAGGT CCTGGTAATG
TATGCCGGGC GTACCATGGA ATACGGTAAG GCGCGCGATG TCTTTTATCA GCCCGTTCAT
CCGTATTCGA TAGGCCTGCT TAATGCGGTG CCGCGTCTGG ATAGCGAGGG GGCGGAAATG
CTGACGATTC CGGGCAATCC TCCCAATTTA TTGCGTTTGC CTAAAGGGTG TCCGTTCCAG
CCGCGTTGTC CTCATGCGAT GGAGATCTGC AATAATGCGC CGCCACTTGA AGCGTTCAGT
CCTGGTCGCT TGCGCGCCTG TTTTAAACCG GTGGAGGAAC TGCTATGA
 
Protein sequence
MSLSETATQA PQPANVLLEV NDLRVTFATP DGDVTAVNDL NFTLRAGETL GIVGESGSGK 
SQTAFALMGL LATNGRIGGS ATFNGREILN LPERELNTLR AEQISMIFQD PMTSLNPYMR
VGEQLMEVLM LHKGMSKAEA FEESVRMLDA VKMPEARKRM KMYPHEFSGG MRQRVMIAMA
LLCRPKLLIA DEPTTALDVT VQAQIMTLLN ELKREFNTAI IMITHDLGVV AGICDKVLVM
YAGRTMEYGK ARDVFYQPVH PYSIGLLNAV PRLDSEGAEM LTIPGNPPNL LRLPKGCPFQ
PRCPHAMEIC NNAPPLEAFS PGRLRACFKP VEELL