Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A1848 |
Symbol | |
ID | 6517248 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 1790464 |
End bp | 1791510 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642746945 |
Product | putative periplasmic protease |
Protein accession | YP_002114748 |
Protein GI | 194735219 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.805473 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.10396 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGAATTGT TGTCTGAATA TGGCTTATTT TTGGCAAAAA TCGTCACTGT TGTGGTGGCC ATTGCCGTCA TTGTGTTGCT GATCGTGAAT GCTACGCAAC GCAAACGTCA GCGCGGCGAG CTGCGCGTGA CCAATTTGAG CGAGCAGTAT CAGGAGATGA AGGATGACCT TGCTGCGGCG TTGATGGATG GCCATCAGCA AAAACTGTGG CATAAAGCGC AGAAAAAAAA GCATAAGCAG GAGGCGAAAG CCGCCAAAGC GAAAGCGAAG CTGGGGGACA TTGCGACATC GGACAAACCG CGCGTATGGG TGATAGATTT CAAAGGCAGT ATGGACGCTC ACGAAGTTAA TGCGTTACGC GAAGAGGTCA CGGCGGTGCT GGCAGTGGCG AAACCCGGCG ATCGGGCGGT TGTGCGTCTG GAAAGCCCCG GCGGCGTTGT GCATGGCTAT GGCCTGGCGG CATCGCAATT GCAGCGCCTG CGCGATAAAA ATATTCCGCT GACCGTGACG GTGGATAAAG TCGCGGCAAG CGGAGGCTAC ATGATGGCCT GCGTGGCGGA AAAAATTATT GCGGCGCCGT TCGCTATTGT GGGGTCAATT GGTGTTGTCG CGCAAATTCC GAACTTTAAC CGCTTTCTCA AAAGTAAAGA CATTGATATT GAACTGCATA CCGCAGGGCA GTACAAACGT ACCCTGACAT TGTTAGGCGA GAATACGGAA GAAGGGCGGC AGAAGTTTCG TGAAGATCTC AACGAAACGC ACCATCTGTT CAAAGAGTTT GTGCAGCGGA TGCGTCCGGC TCTGGACATT GAACAGGTCG CCACGGGCGA ACACTGGTAC GGTCAGCAGG CGCTGGAGAA AGGACTGGTT GATGAGATTA ACACCAGCGA TGAGGTTATC CTCGGCCTGA TGGAAGGGCG TGAGGTGCTG AATGTGCGCT ATATGCAGCG TAAAAAACTG ATCGATCGTG TTACCGGCAG CGCGGCGGAA AGCGCGGATC GGCTGCTGCT GCGCTGGTGG CAGCGTGGAC AAAAACCGTT GATGTAA
|
Protein sequence | MELLSEYGLF LAKIVTVVVA IAVIVLLIVN ATQRKRQRGE LRVTNLSEQY QEMKDDLAAA LMDGHQQKLW HKAQKKKHKQ EAKAAKAKAK LGDIATSDKP RVWVIDFKGS MDAHEVNALR EEVTAVLAVA KPGDRAVVRL ESPGGVVHGY GLAASQLQRL RDKNIPLTVT VDKVAASGGY MMACVAEKII AAPFAIVGSI GVVAQIPNFN RFLKSKDIDI ELHTAGQYKR TLTLLGENTE EGRQKFREDL NETHHLFKEF VQRMRPALDI EQVATGEHWY GQQALEKGLV DEINTSDEVI LGLMEGREVL NVRYMQRKKL IDRVTGSAAE SADRLLLRWW QRGQKPLM
|
| |