| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A1831 |
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| Symbol | |
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| ID | 6518660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011094 |
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| Strand | + |
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| Start bp | 1773928 |
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| End bp | 1775910 |
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| Gene Length | 1983 bp |
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| Protein Length | 660 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642746928 |
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| Product | RNase II stability modulator |
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| Protein accession | YP_002114731 |
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| Protein GI | 194734043 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.238279 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000176038 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGATGAAAC AGATTCAGGA ACAAACGGCG CTAAGTCCCC TTCACTCTCA CTGGCGTCTG
GCTGATAACC GCAACGTGCT GTATCTCTCC CCGACAGGTG AAACGGATGC AGAAAAAACG
GTTGAGCTAT CGCCGGAACA AGCCGGGCGT ATCCGGGAAA TAACGGCGAT TACGTCCAGT
CTGCTGATAA CGTTGTTGAT AGAAAAACAG GTTACCGCTG TGCACCTGGT AGGCCGTAAG
ATTAATAACC GTGAATGGGC TGGCAGCCTG GCAACCTGGC CTGATACGCC TGCCGTCTCG
CCAACGCAGG CGCAGGAGCT CTCTTTTGCC GAGCAAATCG TATCAGAAGC CAACTCAGTC
ATTGCGATAC TGGATAGTCG GGGAAAAATC TGTCGATTTA ATCGGTTATG CGAAGAGTAC
ACGGGCTTAA AAGAGCAAGA TGTAATTGGT CAAAGCGTCT TTAAATTATT TATGAGTCGC
CGGGAGGCGG TTGCCTCCCG GCACTACATT GAGAATTTTT TTCGCAATGG CAATGCCTAT
GAAATCGAAC GCTGGATAAA GACCCGTAAA GGCCAACGCC TGTTCTTATT TCGTAATAAA
TTCGTCCATA ACGGCAGCGG AAAAAACGAA ATTTTCCTGA TCTGCGCAGG CACGGATATC
ACCGAAGAAA GGCGGGCTCA GGAGCGTTTA CGCATACTGG CGAATACAGA CACCGTCACC
GGCCTGCCCA ATCGCAATGC TATTCATGAA TTTATTAATC ATGCTATTGC CTCGGCTGGC
GAGTCGCAAG TGGGTATCGT TTATCTCGAT CTGGATAATT TCAAGAAAAT TAATGACGCC
TATGGGCATA TGTTTGGCGA TCAGCTCTTA CAGGCCGTTT CGCTGGCGCT GTTGAGTTGT
CTGGAGGAAG ATCAATTGCT GGCCAGACTG GGGGGAGATG AATTCATTGT TCTCGCTGCC
CATACGTCTC AGGCCGCGCT GGAAGCAGTA GCCTCACGAA TCCTTACCCG TCTGCGGCAA
CCGTTTCGTA TTGGACTCAT TGAAGTTTAC ACGGGATGCG CCATTGGCAT TTCGTTGGCC
CCCCGGCACG GACAGGACAG CGAAAGTCTC ATTCGCACTG CCGACACCGC AATGTATAAC
GCCAAAGAAG GCGGCCGCGG TCAGTTCTGC GTTTTTTCGC CGGAAATGAA TCAGCGCGTA
TTTGACTATC ACTGGCTGGA TACAAACCTG CGAAAAGCGC TGGAAAACGA CCAGTTACTT
ATTCACTATC AGCCCAAAAT TACCTGGCGC GGCGAAGTAC GTAGCCTGGA AGCGCTGGTA
CGCTGGCAAT CGCCGGAACG CGGATTAATT CCGCCGCTGG AGTTCATCTC ATACGCCGAA
GAGTCAGGAC TCATCGTCCC GCTGGGCCGC TGGGTGATTC TGGATGTGGT TCGCCAGATT
GCGAAATGGC GCGATAAAGG GATTAACTTG CGCGTAGCCG TTAACTTTTC GGCGCGACAA
CTGGCCGACC AGACGCTTTT TACTGCGCTT AAACAGGCTT TGTACGATCT GAATTTTGAG
TATTGCCCGA TCGATGTCGA GCTAACGGAA AGCTGCCTGA TCGAAAACGA CACGCTGGCG
CTATCGGTTA TCCAGCAATT TAGTCAGCTC GGCGCCCAGA TTCATCTGGA TGATTTTGGC
ACCGGGTATT CTTCGCTTTC TCAACTCGCC CGGTTCCCTA TTGATGCCGT TAAACTGGAT
CAGGCTTTCG TCAGAGATAT CCATAAGCAA CCGCTGTCGC AATCTCTGGT TAGGGCGATT
GTCGCGGTGG CTCAGGCGCT AAATTTACAA GTGATTGCCG AAGGTGTAGA AAATGCTAAA
GAAGATGCCT TCCTGACAAA AAACGGCGTC AATGAACGAC AGGGCTTTTT ATTCGCCAAA
CCTATGCCCG CCGTTTCTTT TGAACGCTGG TACAAACGTT ATCAGACGAA AAAAATGCGT
TAA
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| Protein sequence | MMKQIQEQTA LSPLHSHWRL ADNRNVLYLS PTGETDAEKT VELSPEQAGR IREITAITSS
LLITLLIEKQ VTAVHLVGRK INNREWAGSL ATWPDTPAVS PTQAQELSFA EQIVSEANSV
IAILDSRGKI CRFNRLCEEY TGLKEQDVIG QSVFKLFMSR REAVASRHYI ENFFRNGNAY
EIERWIKTRK GQRLFLFRNK FVHNGSGKNE IFLICAGTDI TEERRAQERL RILANTDTVT
GLPNRNAIHE FINHAIASAG ESQVGIVYLD LDNFKKINDA YGHMFGDQLL QAVSLALLSC
LEEDQLLARL GGDEFIVLAA HTSQAALEAV ASRILTRLRQ PFRIGLIEVY TGCAIGISLA
PRHGQDSESL IRTADTAMYN AKEGGRGQFC VFSPEMNQRV FDYHWLDTNL RKALENDQLL
IHYQPKITWR GEVRSLEALV RWQSPERGLI PPLEFISYAE ESGLIVPLGR WVILDVVRQI
AKWRDKGINL RVAVNFSARQ LADQTLFTAL KQALYDLNFE YCPIDVELTE SCLIENDTLA
LSVIQQFSQL GAQIHLDDFG TGYSSLSQLA RFPIDAVKLD QAFVRDIHKQ PLSQSLVRAI
VAVAQALNLQ VIAEGVENAK EDAFLTKNGV NERQGFLFAK PMPAVSFERW YKRYQTKKMR
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