Gene SeSA_A1827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1827 
Symbol 
ID6518388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp1767542 
End bp1768519 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content41% 
IMG OID642746925 
Producthypothetical protein 
Protein accessionYP_002114728 
Protein GI194736387 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.000425947 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones9 
Fosmid unclonability p-value0.00763521 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACCGAGA CGGAGTGTTC TGAACATTGC GTCGATTTTT TAAAAGAAAC GATGTTTAAT 
TATAATAATG GGGAAATTAC GCTTGCCGCT TTAGATAATG ATAACCAGCC GCCGAGCGAA 
GCAGGTAGTA ATGGAATCTA TGAGGCTTTT GAGCAACGTT TGATAGACTT CCTGACCACG 
CCCGCCATGG CGTCTGGTGA TGAGAGCGGC GATACTGATC AGACGGATGC ATCACAACCA 
GCGGCAATAG AGGCGTTTAT TAACTCGTCG GAGTTTAAAA AAAATATCCG CATGCATGAT 
ATTGAAAAAA ATAAAATAGG TAGCGGAAGT TATGGGACAG TCTATCTGTT AAATGATGAG 
TTTGTTGTTA AGATTCCAAT TAATGAGCGG GGAATAAAAG TGGATGTTAA CTCTCCGGAA 
CATCGTAATT GTCATCCTGA TCGTGTCAGT AAGTATTTGA ACATGGCCAA TGGCGACAAG 
GATTTTTCTC GTTCGGCCAT CATGAATATT AATGGTAAAG ACGTTACGGT TTTAGTTTCA 
AAATATATTC AAGGTCAGGA GTTCGATATT GAAGATGAAG ATAACTATCG AATGGCGGAG 
GCGCTTCTTG AATCCCGGGG GGTTTATATG CATGATATAG ATAACTTAGG TAATATTCTG 
GTTAAAGAGG GGGTACTTTT CTTTGTGGAT GGCGATCAAA TCGTGCTGTC ACAAGAATCC 
CGGCAACAGC GAAGCGTTTC TCTTGCAACA AGGCAACTGG AAGAGCAAAT TAAGGCCCGT 
TACCTGATAA AATTAAAGCA GGCCGAGACC GAAGGAAATA CTGAAGATAT TGAATATTAT 
AAGTCACTTA TTACAGAGCT TGATGAGTTA ATCGGAGAGG AAGAACAGAC ACCTGCGTCA 
GGAAGACGTT TTAAACTAGC CGCGCCGGAG GAAGGGACTC TTGTGGCTAA AGTATTAAAG 
GATGAATTAA AAAAATAG
 
Protein sequence
MTETECSEHC VDFLKETMFN YNNGEITLAA LDNDNQPPSE AGSNGIYEAF EQRLIDFLTT 
PAMASGDESG DTDQTDASQP AAIEAFINSS EFKKNIRMHD IEKNKIGSGS YGTVYLLNDE 
FVVKIPINER GIKVDVNSPE HRNCHPDRVS KYLNMANGDK DFSRSAIMNI NGKDVTVLVS 
KYIQGQEFDI EDEDNYRMAE ALLESRGVYM HDIDNLGNIL VKEGVLFFVD GDQIVLSQES 
RQQRSVSLAT RQLEEQIKAR YLIKLKQAET EGNTEDIEYY KSLITELDEL IGEEEQTPAS 
GRRFKLAAPE EGTLVAKVLK DELKK