Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A1823 |
Symbol | |
ID | 6515752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 1763663 |
End bp | 1764553 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642746921 |
Product | peptide transport system permease SapC |
Protein accession | YP_002114724 |
Protein GI | 194735977 |
COG category | [V] Defense mechanisms |
COG ID | [COG4171] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00309217 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCCTTACG ATAGCGTCTA CAGCGAAAAG CGCCCGCCAG GCACCCTGCG TACTGCCTGG CGCAAATTTT ATAGCGACGC GCCTGCGATG GTGGGTCTGT ATGGATGCGC CGGTCTGGCG TTGTTGTGTA TTTTTGGCGG CTGGATCGCG CCCTATGGTA TCGATCAGCA ATTTTTGGGC TATCAGCTAC TGCCGCCCTC CTGGTCACGC TATGGCGAAG TCTCCTTTTT TCTGGGGACT GACGATCTGG GGCGCGATGT GCTGAGCCGC CTGTTAAGCG GCGCGGCGCC CACGGTCGGC GGCGCGTTTA TCGTAACGCT GGCGGCTACG CTATGTGGAT TAGTCCTCGG CGTAGTGGCA GGCGCGACGC ACGGTTTACG CTCTGCCGTA CTGAACCATA TTCTGGACAC GCTGCTTTCC ATCCCTTCGC TCTTGCTGGC GATTATCGTC GTGGCATTTG CCGGCCCACA TCTGTCACAC GCGATGTTTG CCGTCTGGCT GGCCCTGTTG CCGCGAATGG TACGTTCCGT CTATAGCATG GTGCATGATG AACTGGAAAA AGAGTACGTC ATTGCCGCCC GTCTGGATGG CGCGACAACG CTGAATATTC TGTGGTTCGC CATTTTACCG AATATTACCG CCGGTCTGGT CACCGAAATT ACCCGGGCGC TGTCGATGGC GATTCTGGAC ATCGCCGCGC TGGGATTTTT AGATCTCGGC GCGCAGCTTC CCTCTCCTGA ATGGGGCGCC ATGTTGGGAG ATGCGCTGGA GCTAATCTAT GTCGCGCCGT GGACCGTTAT GCTACCCGGC GCGGCGATAA CGCTCAGTGT TTTACTGGTA AACCTGCTCG GAGATGGGAT TCGTCGTGCG ATTATTGCGG GGGTGGAATA A
|
Protein sequence | MPYDSVYSEK RPPGTLRTAW RKFYSDAPAM VGLYGCAGLA LLCIFGGWIA PYGIDQQFLG YQLLPPSWSR YGEVSFFLGT DDLGRDVLSR LLSGAAPTVG GAFIVTLAAT LCGLVLGVVA GATHGLRSAV LNHILDTLLS IPSLLLAIIV VAFAGPHLSH AMFAVWLALL PRMVRSVYSM VHDELEKEYV IAARLDGATT LNILWFAILP NITAGLVTEI TRALSMAILD IAALGFLDLG AQLPSPEWGA MLGDALELIY VAPWTVMLPG AAITLSVLLV NLLGDGIRRA IIAGVE
|
| |