| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A1818 |
|---|
| Symbol | |
|---|
| ID | 6515612 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | + |
|---|
| Start bp | 1758499 |
|---|
| End bp | 1759464 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642746919 |
|---|
| Product | peptide transport system permease SapB |
|---|
| Protein accession | YP_002114722 |
|---|
| Protein GI | 194735684 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG4168] ABC-type antimicrobial peptide transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.350212 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0970884 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTATCT TCACCCTGCG TCGGTTATTG CTGTTGCTGG TGACGCTATT CTTCCTGACC
TTTATCGGCT TTAGCCTGAG CTATTTTACG CCGCACGCGC CGCTACAAGG CGCATCATTA
TGGAATGCCT GGGTTTTCTG GTTCAATGGT CTGCTGCACT GGGACTTTGG CGTGTCCAGC
ATTAACGGCC AGCTGATCTC CGAACAGCTT AAAGAGGTGT TTCCCGCCAC GATGGAGCTG
TGCATTCTCG CCTTTGGTTT TGCGCTGATG GTCGGCATCC CGGTCGGGAT GCTGGCTGAC
GTGACGCGTA GCAAATGGCC GGATCGTTTT ATCAGCGCGC TGGCGCTATT AGGTTTCTCA
ATTCCGGTTT TCTGGCTGGC GCTTCTGCTC ACACTGTTCT TTTCGCTCAC GCTGGGGTGG
CTGCCGGTAT CCGGGCGATT TGACCTGCTT TACGAAGTTA AACCGGTTAC CGGTTTCGCC
ATCATTGACG CCTGGATTTC AGATTCGCCG TGGCGCGATG AAATGGTAAT GAGCGCCATA
CGGCATATGG TTTTACCGGT GCTCACGCTT TCCGTCGCGC CGACCACAGA AGTGATCCGC
CTGATGCGAA TCAGCACTAT TGAGGTCTAC GATCAGAACT ACGTTAAAGC GGCGGCCACG
CGCGGCTTGT CGCGCTTTAC GATTTTACGT CGTCACGTGT TGCATAATGC GCTGCCGCCG
GTCATTCCCC GTCTTGGCCT GCAGTTTTCA ACCATGTTAA CGCTGGCGAT GATTACCGAA
ATGGTTTTCA GCTGGCCTGG GCTGGGACGA TGGTTAATTC ACGCCATTCG TCAGCAGGAC
TATGCCGCTA TTTCCGCTGG CGTGATGGTC ATTGGGTCGC TGGTTATTGT GGTCAATGTG
ATTTCCGATA TTTTGGGTGC TATGGCTAAC CCTCTGAAAC ATAAGGAATG GTATGCCTTA
CGATAA
|
|---|
| Protein sequence | MIIFTLRRLL LLLVTLFFLT FIGFSLSYFT PHAPLQGASL WNAWVFWFNG LLHWDFGVSS
INGQLISEQL KEVFPATMEL CILAFGFALM VGIPVGMLAD VTRSKWPDRF ISALALLGFS
IPVFWLALLL TLFFSLTLGW LPVSGRFDLL YEVKPVTGFA IIDAWISDSP WRDEMVMSAI
RHMVLPVLTL SVAPTTEVIR LMRISTIEVY DQNYVKAAAT RGLSRFTILR RHVLHNALPP
VIPRLGLQFS TMLTLAMITE MVFSWPGLGR WLIHAIRQQD YAAISAGVMV IGSLVIVVNV
ISDILGAMAN PLKHKEWYAL R
|
|---|
| |