| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A1816 |
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| Symbol | pspF |
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| ID | 6519484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011094 |
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| Strand | + |
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| Start bp | 1755746 |
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| End bp | 1756741 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642746917 |
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| Product | phage shock protein operon transcriptional activator |
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| Protein accession | YP_002114720 |
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| Protein GI | 194734642 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1221] Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain |
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| TIGRFAM ID | [TIGR02974] psp operon transcriptional activator PspF |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.233716 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGATTT TCATCATGGC TGAATTTAAA GATAACCTGC TCGGCGAGGC AAACCGTTTT
CTTGAAGTAC TGGAACAAGT CTCCCGGCTC GCGCCGCTGG ATAAGCCAGT GCTGATTATT
GGCGAACGCG GTACGGGTAA AGAACTTATC GCCAATCGCC TGCACTATCT CTCTTCACGC
TGGCAGGGGC CGCTTATCTC GCTTAACTGC GCGGCGCTTA ACGAAAATCT GCTGGACTCC
GAACTGTTTG GTCATGAAGC GGGCGCTTTT ACCGGGGCGC AAAAACGTCA TCCCGGTCGC
TTTGAACGCG CCGATGGCGG CACGCTGTTT TTGGATGAAC TGGCGACAGC GCCGATGCTG
GTACAGGAAA AGCTGCTGCG GGTGATTGAA TATGGCGAGC TAGAGCGCGT CGGCGGCAGC
CAGCCGTTAC AGGTTAATGT GCGATTAGTA TGCGCCACCA ATGCCGATTT ACCCGCCATG
GTAAAGGAAG GGACATTTCG TGCCGATCTG CTCGACAGGC TGGCTTTTGA TGTTGTACAA
CTGCCGCCGC TGCGCGAACG CCAGAGCGAT ATCATGCTGA TGGCCGAGCA TTTTGCTATT
CAGATGTGTC GTGAACTACG TCTGCCCTTA TTTCCCGGTT TTACCGATCG GGCAAAAGAA
ACGTTGTTGC ATTACGCCTG GCCGGGTAAT GTCCGCGAGC TGAAAAACGT AGTCGAACGT
TCAGTGTATC GCCACGGCAG TAGTGAACAT CCTTTGGATG AAATTGTTAT CGATCCTTTT
CAACGCCATC CCGCCGAACC GCCCGCGCCC GCCCTGCCAT CGGCAACCGC CACGCCCGAC
CTGCCGCTCA AGTTGCGGGA GTTTCAACTG CAACAGGAAA AAGCGCTGCT GCAACGTAGC
TTACAGCAGG CGAAATTTAA CCAGAAACGA GCCGCCGATT TGCTGGCGCT CACCTACCAC
CAGTTTCGCG CCTTGCTTAA AAAGCATCAG CTTTAG
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| Protein sequence | MAIFIMAEFK DNLLGEANRF LEVLEQVSRL APLDKPVLII GERGTGKELI ANRLHYLSSR
WQGPLISLNC AALNENLLDS ELFGHEAGAF TGAQKRHPGR FERADGGTLF LDELATAPML
VQEKLLRVIE YGELERVGGS QPLQVNVRLV CATNADLPAM VKEGTFRADL LDRLAFDVVQ
LPPLRERQSD IMLMAEHFAI QMCRELRLPL FPGFTDRAKE TLLHYAWPGN VRELKNVVER
SVYRHGSSEH PLDEIVIDPF QRHPAEPPAP ALPSATATPD LPLKLREFQL QQEKALLQRS
LQQAKFNQKR AADLLALTYH QFRALLKKHQ L
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