Gene SeSA_A1806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1806 
Symbol 
ID6517907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp1747678 
End bp1748643 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content58% 
IMG OID642746907 
Productmandelate racemase / muconate lactonizing enzyme, N- domain protein 
Protein accessionYP_002114710 
Protein GI194738379 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.384509 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.463318 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATCTG TTAAGGTATA TGAGGAAACC TGGCCGTTGC ATACGTCTTT CGTTATTGCG 
CGTGGTAGCC GAAGCGAAGC GCATGTTGTC GTTGTCGAAC TGGAAGAAGA GGGCGTAAAA 
GGCATCGGGG AATGTACGCC ATATCCACGT TATGGTGAAA GTGATGCCTC GGTCATGGCG 
CAAATCATGA GTATTGTGCC TCAGTTGGAA AACGGGCTGA CTCGCGAAGC ATTGCAGAAA 
CTGTTGCCGG CAGGCGCGGC GCGCAACGCG GTGGATAGCG CCTTATGGGA TTTGCAGGCC 
CGCCAGCGGC AGCAAAGCCT TGCCGGGCTG CTCGGCGTGA CGCTGTCCCC GGTTTTTACT 
ACCGCGCAAA CGGTAGTGAT AGGCACGCCG GAACAGATGG CAGCCAGTGC GGCGGCACTA 
TGGGAAAAAG GGGCGACGTT GCTGAAAATC AAACTCGATG CTCGTCTGAT TAGCGAACGT 
ATGGTGGCGA TCCGCGCGGC GGTGCCGGAG GCGACGCTCA TTGTGGACGC CAATGAATCG 
TGGCGTCCGG AGGGGCTGGC GGCGCGTTGC CAGTTACTGG CGGATCTGAA TGTCGCGATG 
CTGGAGCAAC CGCTGCCCGC GCAGGATGAC GCCGCCCTGG AAAATTTTAT TCATCCGTTG 
CCTATCTGTG CAGATGAGAG CTGCCATACT CGCAGTAGTC TGAAAGCCCT GACGGGGCGC 
TACGATATGA TCAACATTAA GCTGGATAAA ACCGGCGGTC TGACCGAGGC GCTGGCGCTG 
GCAACGGAGG CGCGGGAGCA AGGATTCGGC CTGATGCTGG GCTGTATGCT CTGTACATCA 
AGAGCGATTA GCGCCGCGCT GCCGCTTATG CCGCAGGTGA GCTTCGCCGA TCTTGATGGC 
CCAACATGGC TGGCGGTTGA TGTTGAGCCC GCGCTACGCT TTACGACGGG TCAACTCCAT 
CTTTAG
 
Protein sequence
MRSVKVYEET WPLHTSFVIA RGSRSEAHVV VVELEEEGVK GIGECTPYPR YGESDASVMA 
QIMSIVPQLE NGLTREALQK LLPAGAARNA VDSALWDLQA RQRQQSLAGL LGVTLSPVFT 
TAQTVVIGTP EQMAASAAAL WEKGATLLKI KLDARLISER MVAIRAAVPE ATLIVDANES 
WRPEGLAARC QLLADLNVAM LEQPLPAQDD AALENFIHPL PICADESCHT RSSLKALTGR 
YDMINIKLDK TGGLTEALAL ATEAREQGFG LMLGCMLCTS RAISAALPLM PQVSFADLDG 
PTWLAVDVEP ALRFTTGQLH L