Gene SeSA_A1802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1802 
Symbol 
ID6517327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp1743121 
End bp1744026 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content55% 
IMG OID642746903 
Productregulatory protein LysR:LysR, substrate-binding 
Protein accessionYP_002114706 
Protein GI194737898 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.450792 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAGC TGGAAGCGAT GCAGGTCTAT GTTTGCGTAG TGGATACCCA TAGTTTTATC 
AGAGCCGCCG AAGTGCTGGG CGTGCCGCGC TCAACGGTAT CGCGGGTGGT TAAAGAACTG 
GAATCCTGGC TTAAGATTCA GCTTTTGCAA CGTACAACCC GCAAACTTAG CGTGACCGCA 
GAGGGGCGGC GTTACTACGA AGAGTGCAAA AGAGTACTGG CAGATATCGC GGCCATGGAG 
TCGTCATTTC CCGGCCGGGC GGCACAACCC AAAGGGCGTT TTAAAGTAGG GATGCCGCAA 
TCTCTCGCCC GGCATTGCAT TATTCCCACG CTCCCGGCCT TTTTGCGCCA GTATCCGGAG 
CTGGAGCTGA TACTTTGTTC CAGCGATAGC GTGGAGGATA TTATCCTGCA AGGGTATGAC 
TGCGTGATTC GGGCCGGCAG GATCGATGAT TCCACCACGC TGGTTGCCCG TCCACTTGCC 
AGCTTTAACT GGGTGATAGC AGCATCGCCC ACTTACATTG AGCGTTACGG TAGCCCTGAA 
AATTTAGATG ATCTGCAAAA ACACCATGCG GTCGGCTACC TGAACCACCG CACTGGGCGT 
ACCACCGACT GGTTTTTTAC GCGTGAGGGG AAGGATTACG CGATGCGGGT GCAGGAGACG 
CTGGTTGTCG ATGATACGGA CGCTTATATT CAGGCCGGAA TACAGGGGCT GGGGTTAATT 
CGCGTCGCCA GCTATCTGGT TGCGCCGTAT CTGCACAGTG GGGCGCTGGT GACCTGCATG 
GACAACCATT CTTATGATTT GCCGCTTGCG CTGGTCTATC CGCAAAACAG GTTTCTGCCG 
CCTACGGTAC GCGCTTTTTA TGACTGGTGC AAAACGGCGC TGAGCCAGCC GGAGTCTCTT 
CGCTAA
 
Protein sequence
MDKLEAMQVY VCVVDTHSFI RAAEVLGVPR STVSRVVKEL ESWLKIQLLQ RTTRKLSVTA 
EGRRYYEECK RVLADIAAME SSFPGRAAQP KGRFKVGMPQ SLARHCIIPT LPAFLRQYPE 
LELILCSSDS VEDIILQGYD CVIRAGRIDD STTLVARPLA SFNWVIAASP TYIERYGSPE 
NLDDLQKHHA VGYLNHRTGR TTDWFFTREG KDYAMRVQET LVVDDTDAYI QAGIQGLGLI 
RVASYLVAPY LHSGALVTCM DNHSYDLPLA LVYPQNRFLP PTVRAFYDWC KTALSQPESL 
R