Gene SeSA_A1799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1799 
Symbol 
ID6517618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp1740504 
End bp1741094 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content56% 
IMG OID642746900 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002114703 
Protein GI194737106 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.405441 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACAA AACATAGTCG AACGCCGGGT CGTCCTCGCC AGTTCGATCC GGAGCAAGCC 
ATTGAAACCG CTCAACACTT ATTTCATTCG CGCGGCTACG ACGCGGTGAG CGTAGCGGAT 
CTGACAAAAG CGTTCGGGAT CAATCCTCCC AGTTTCTATG CGGCGTTTGG CAGCAAGCTG 
GGGCTGTATA CCCGCGTATT AAAGCGTTAC AGGATGACCG ACGCGATTCC GCTCGGGGCG 
CTTCTGCGTC ACGATCGCCC GACCGCGAAG TGCCTTATTG ATGTGCTGAT GGAAGCGGCA 
AGACGTTACG TTGCCGATCC TGATGCCACT GGATGTCTGG TTCTGGAGGG CGCTCATTGT 
AACGATAAAC CGGCACGAGA GGCCGCCTGC GAGTTTTACA TCGCTGCTGA AAACCTGATT 
CGCACTTATG TCGCCATGCG GTATCCGCAA GAGGCTGACC GGATGACTGA CTTTATGGGG 
ACGCTAATGG CGGGGCTTTC CGCCAAGGCG CGAGCGGGGT ATAGCCTGGA GCGTCTTCAG 
GAGAGCGTAC TTCTGGCTGG AGATGTGCTG GAGCGATTAC TACCGGATTA A
 
Protein sequence
MTTKHSRTPG RPRQFDPEQA IETAQHLFHS RGYDAVSVAD LTKAFGINPP SFYAAFGSKL 
GLYTRVLKRY RMTDAIPLGA LLRHDRPTAK CLIDVLMEAA RRYVADPDAT GCLVLEGAHC 
NDKPAREAAC EFYIAAENLI RTYVAMRYPQ EADRMTDFMG TLMAGLSAKA RAGYSLERLQ 
ESVLLAGDVL ERLLPD