Gene SeSA_A1796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1796 
Symbol 
ID6517318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp1737576 
End bp1738427 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content38% 
IMG OID642746897 
Productputative regulatory protein 
Protein accessionYP_002114700 
Protein GI194737385 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.131481 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.259376 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG CCATAATAAT CTCAGTATTA GAGCAAATAG AAAAAAATCT TGAAGAGAGG 
ATTGATATTG AAAAGCTGGT TGTTATAACA GGTTATTCGC GAAGGAGTTT GCAGGATTTT 
TTTAAAGAAA AGTGTGGAGT CTCTATCGGA AAATATATCA GACAACGCAA GTTGAGCAGA 
AGCGCCACTC TGCTAAAGCT GACCTCTCAG TCGGTCACAG ATATCGCGTT CAGAATGGGG 
TTTGATTCAG TGCAGTCCTA TAGTCGAGAG TTCAAAAAAA CATTTGGTGT CAATCCCAAT 
AACTATCGCA AGGCTGATTT CTGGGATCTC AGAAACCTAC GGCCTCCCTA CTGGCTTGAC 
TGTGATGAGC ATTATCAGTT CGAAATTTGT CAGCTTACGT CAAAAGAAAT TTTCGGATTT 
CAAACATCTC ATCAGATCGC AACAAATGAC CTTCCTAAAA AAGCGTCGCC TATAAAATGG 
AAAATCATTC ATGAGACGCT CAGAACGTGG GGCGAAAATG TGTATTGTCT CTCGTCTTTT 
AAGCCGGATC ATACCAATGA CCAGGTCATC GCCGTAAGCA GTTTTTTTGG TATGGAACAT 
AATTCCGTCG ATGGAGGCAA AATACCCATG TCGAGGGTAA TAAAATGTGG TAAATATGCA 
AAATTCCATT TCGTTGGTCA TAAGGAAAAA TATCAACAAT TTTCCAATAC AATATATATG 
TGTATATTGC CAAAACTGAA TCTTATCAGG AGAGAAGGAG AAGATATTGA ATACTTCCAT 
TTGGCATCCG TCCAAAAGCA ACAGAATAAT GAATCCATTG TCGATCTTTA TTATTATATC 
CCTGTACTGT AA
 
Protein sequence
MKKAIIISVL EQIEKNLEER IDIEKLVVIT GYSRRSLQDF FKEKCGVSIG KYIRQRKLSR 
SATLLKLTSQ SVTDIAFRMG FDSVQSYSRE FKKTFGVNPN NYRKADFWDL RNLRPPYWLD 
CDEHYQFEIC QLTSKEIFGF QTSHQIATND LPKKASPIKW KIIHETLRTW GENVYCLSSF 
KPDHTNDQVI AVSSFFGMEH NSVDGGKIPM SRVIKCGKYA KFHFVGHKEK YQQFSNTIYM 
CILPKLNLIR REGEDIEYFH LASVQKQQNN ESIVDLYYYI PVL