Gene SeSA_A1790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1790 
Symbol 
ID6516264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp1731715 
End bp1732401 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content54% 
IMG OID642746891 
ProductB3/4 domain protein 
Protein accessionYP_002114694 
Protein GI194737950 
COG category[S] Function unknown 
COG ID[COG3382] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.23323 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCTA TGTTACCGTC AATCAGCCCG GAACTGGCCC GTATCGCTCC CGGCTTTCGT 
GCATTAAGTA TTAATGTTAT TGCCGCTCCG GTTCGCGATG CGCAGGTCGG AGAAATCGCG 
TTAAAAGAGG CCTGTCAGGC CGTAATCAAC GGACAACCGG CGTGGGCACA GGCGCATATA 
GACGCCTGGA ATGCAGTGTT TAAAGCATTC GGCGCAAAAC CAAAGCGCAC CCCCTGCTCG 
GCTGAAGCGC TACGAAAACG CGTGTTGAAG GATGGAACAA TGGCGTCGCT GGACCCGGTT 
GTTGACCTTT ATAACGCCGT GAGCCTGCGC TATGCCGTAC CGGTAGGCGG CGAAAATAGC 
GCGGCTTATT GTGGATCGCC GCGGCTGGTT TTCGCAGACG GAAGTGAAAC ATTTGATACC 
CTGAAAGAAG GACAACCCGT CACCGAGTCG CCAGAACCGG GCGAAGTTAT CTGGCGCGAT 
GACAGAGGCG TCACCTGTCG GCGCTGGAAC TGGCGTCAGG GAGTACGTAC CCGACTAAGC 
GCTTCAGATA AAGCGATGTG GTTTATCCTT GAAAGCTTGC CGGAAATGCC GGTTGATGAA 
TTGTACGCGG CAGGAAACAT GCTGACTGAC GGCCTTGAAA AAATGATGCC AGGTTTACGT 
TTTGAATCCA CGTTGATGGG TGTCTGA
 
Protein sequence
MSSMLPSISP ELARIAPGFR ALSINVIAAP VRDAQVGEIA LKEACQAVIN GQPAWAQAHI 
DAWNAVFKAF GAKPKRTPCS AEALRKRVLK DGTMASLDPV VDLYNAVSLR YAVPVGGENS 
AAYCGSPRLV FADGSETFDT LKEGQPVTES PEPGEVIWRD DRGVTCRRWN WRQGVRTRLS 
ASDKAMWFIL ESLPEMPVDE LYAAGNMLTD GLEKMMPGLR FESTLMGV