Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A1778 |
Symbol | |
ID | 6516796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 1721468 |
End bp | 1722841 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642746880 |
Product | ATP-dependent RNA helicase DbpA |
Protein accession | YP_002114683 |
Protein GI | 194736572 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.105627 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGCTT TTTCAACCCT GAATGTTTTG CCCGCCGCCC AGCTCAATAA CCTTACTGAG CTGGGCTATC TTGAGATGAC GCCTGTTCAG GCCGCAGCAT TACCCGTCAT TCTGGCGGGA AATGATGTGC GTGTGCAGGC CAGGACCGGT AGCGGCAAAA CGGCGGCGTT TGGTCTTGGG CTCTTGCATC GAATTGATGT CACTCTGTTC CAGACACAGG CATTAGTGCT GTGTCCGACG CGGGAGCTGG CGGATCAGGT TGCCGGAGAG TTACGTCGCC TGGCCCGTTT TCTGCCAAAT ACCAAAATTC TGACCTTGTG TGGCGGGCAA CCCTTTGGCG CACAGCGCGA CTCGCTTCAG CACGCTCCGC ATATCATTGT CGCGACGCCG GGGCGCCTGC TGGATCATTT ACAAAAAGAA ACCGTATCGC TGGATGCGCT GCACATTCTG GTAATGGATG AAGCAGACCG AATGCTGGAC ATGGGATTCA GTGACGCCAT TGATGAGGTG ATCCGCTTTG CGCCTGAGAC GCGCCAGACG TTATTGTTTT CAGCAACCTG GCCTGACGCC ATTGCGGCGA TTAGCGGTCG TGTACAGCAG CAGCCAATAC GTATTGAAAT CGATACGGTA GATGCGCTAC CGGCTATCGA ACAACAGTTC TTCGAAACGT CTGCGCATGA AAAAATTTCG CTGCTACAAA CGTTGCTTAG CCAGCATCAG CCAGCGTCCT GCGTGGTGTT TTGCAATACC AAAAAAGATT GTCAGGCCGT TTGTGATGCG CTTAATGCGG TAGGACAAAG CGCGTTGGCG CTCCACGGCG ATCTGGAACA ACGCGACCGC GACCAGACGT TGGTGCGTTT TGCAAATGGC AGCGCGCGCA TTCTGGTTGC CACCGACGTT GCCGCGCGAG GGTTAGACAT TAAATCGCTC GAACTGGTGG TTAACTATGA GCTGGCCTGG GACCCGGAGG TGCATGTCCA TCGTATTGGC CGTACGGCGC GCGCGGGAAG TAGCGGTCTG GCGATCAGTT TCTGCGCGCC GGAAGAGGCG CAGCGGGCAA ATATTCTTTC AGAAATGCTG CAACTCAAAC TGAACTGGCT GAATGCGCCC GCCCGGCAGT CGTTGCTCCC TCTGGCCGCA GAGATGGCTA CCCTATGTAT TGACGGCGGC AAAAAAGCGA AAATGCGTCC GGGAGATATT TTAGGCGCGC TGACCGGCGA TATTGGATTA GACGGGGCGG ATATCGGCAA AATTAACGTG CATCCCATGC ACGTTTACGT CGCCGTACGT CAAGCAGTAG CGCAAAAAGC CTGGAAGCAG TTGCAAAACG GGAAGATCAA AGGCAAGTCA TGCCGGGTAC GGCTATTAAA ATGA
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Protein sequence | MTAFSTLNVL PAAQLNNLTE LGYLEMTPVQ AAALPVILAG NDVRVQARTG SGKTAAFGLG LLHRIDVTLF QTQALVLCPT RELADQVAGE LRRLARFLPN TKILTLCGGQ PFGAQRDSLQ HAPHIIVATP GRLLDHLQKE TVSLDALHIL VMDEADRMLD MGFSDAIDEV IRFAPETRQT LLFSATWPDA IAAISGRVQQ QPIRIEIDTV DALPAIEQQF FETSAHEKIS LLQTLLSQHQ PASCVVFCNT KKDCQAVCDA LNAVGQSALA LHGDLEQRDR DQTLVRFANG SARILVATDV AARGLDIKSL ELVVNYELAW DPEVHVHRIG RTARAGSSGL AISFCAPEEA QRANILSEML QLKLNWLNAP ARQSLLPLAA EMATLCIDGG KKAKMRPGDI LGALTGDIGL DGADIGKINV HPMHVYVAVR QAVAQKAWKQ LQNGKIKGKS CRVRLLK
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