Gene SeSA_A1743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1743 
Symbol 
ID6516811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp1685615 
End bp1686538 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content55% 
IMG OID642746847 
ProductLysR substrate binding domain protein 
Protein accessionYP_002114650 
Protein GI194737980 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.574272 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAA ATGGTCTGTT TAGTCAGCGC ATTCGGTTGC GCCACCTTCA TACATTTGTC 
GCCGTTGCGC AACAGGGAAC GCTGGGGCGC GCGGCTGAAA CCCTTAACCT GAGCCAGCCA 
GCGCTTTCTA AAACGCTGAA CGAACTGGAA CAACTCACCG GAACCCGTCT GTTCGAACGC 
GGGCGACTGG GCGCGCAATT AACGGTTCCT GGCGAACAAT TTTTGACTCA TGCGGTAAAA 
GTATTAGATG CATTGAATAC CGCCGGGCAG GCGCTGAATC GCAAAGAGGA CGCCAGCGCC 
GATGTGGTGC GTGTTGGCGC GCTCCCCACC GCTGCGCTGG GTATACTCCC GGCGGCTATT 
GGGCGGTTCC ATCAACAGCA AAAATCGACC TCGTTACAGG TCGCGACCAT GAACAATACG 
ATGTTGCTTG CGGGTCTCAA GTCAGGCGAG ATCGATCTGG GTATTGGCCG CATGTCAGAC 
CCGGAATTAA TGGGCGGTTT AAATTACGAA CTGCTGTTTT TAGAATCGCT TAAATTAGTG 
GTACGCCCCG GTCATCCCCT GTTACAGGAG ACGATCACGC TCAGTCGGGT TATGGAATGG 
CCGGTAGTCG TCTCGCCAAA AGGCACGGTA CCGCGCCAGA ATGCGGAAGC CCTGTTGCAA 
AGCCAGGGGT GTAAAATGCC TGCCGGATGT ATCGAAACGC TATCCGCATC GTTATCACGA 
CAACTTACCG TAGATTACGA TTACGTCTGG TTCGTCCCCT CTGGCGCGGT TAAAGAAGAT 
CTTCGCCAGG CAACGCTGGT CTCATTACCC GTGCCGACCC AGAGCGCAGG CGAACCGATA 
GGTATTCTTA CGCGAGTTGA TATCCCGCTC TCAACCGGGG CGCAAATGCT GATTGCGGCG 
ATCCGTAAAT CGATGCCGCT GTGA
 
Protein sequence
MEKNGLFSQR IRLRHLHTFV AVAQQGTLGR AAETLNLSQP ALSKTLNELE QLTGTRLFER 
GRLGAQLTVP GEQFLTHAVK VLDALNTAGQ ALNRKEDASA DVVRVGALPT AALGILPAAI 
GRFHQQQKST SLQVATMNNT MLLAGLKSGE IDLGIGRMSD PELMGGLNYE LLFLESLKLV 
VRPGHPLLQE TITLSRVMEW PVVVSPKGTV PRQNAEALLQ SQGCKMPAGC IETLSASLSR 
QLTVDYDYVW FVPSGAVKED LRQATLVSLP VPTQSAGEPI GILTRVDIPL STGAQMLIAA 
IRKSMPL