Gene SeSA_A1740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1740 
SymbolmdoD 
ID6516179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp1680547 
End bp1682166 
Gene Length1620 bp 
Protein Length539 aa 
Translation table11 
GC content55% 
IMG OID642746844 
Productglucan biosynthesis protein D 
Protein accessionYP_002114647 
Protein GI194734298 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3131] Periplasmic glucans biosynthesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCCG TGTGCGGTTC CAGCGGTATT GCTTCACTCT TTTCTCAGGC GGCGTTTGCC 
GCGGAATCCG ATATTGCGGA TGGTAAAATT GTCCGTTTTG ATTTTGCTGG TCTGCAATCA 
ATGGCCCAGG CGTTAGCGAA AAAGCCCTGG GGCGGCGCGC CGGGACCCTT GCCGGATACG 
CTCGCCAATC TGACGCCGCA GGCCTATAAC AGCATTCAGT ATGACGCGGC GCATTCACTC 
TGGAACGGTG TTGCCAACCG GCAGCTCGAT ATTCAGTTTT TCCACGTAGG GATGGGCTTT 
CGTCGTCGCG TACGCATGTT TTCCGTTGAT ACGACGACGC ATCTTGCTCG CGAGATTCAT 
TTTCGCCCGG AACTGTTTAA ATACAACGAT GCCGGCGTCG ATACGACGCA ACTGGAAGGG 
CAGAGCGATC TCGGTTTCGC CGGTTTCCGT GTCTTTAAAG CGCCGGAACT GGCGCGGCGC 
GATGTCGTCT CCTTCCTGGG CGCCAGTTAT TTCCGGGCGG TAGATGATAC TTATCAGTAT 
GGCCTGTCGG CTCGCGGGCT GGCGATAGAT ACCTATACTG ACGGTCAGGA AGAGTTCCCT 
GACTTCACCG CATTCTGGTT TGACACCGCG AAGCCGGGCG ATACTACATT TACCGTTTAC 
GCTCTGCTGG ACAGCGCCAG CGTGACGGGC GCGTATAAAT TTGTGATTCA TTGCGAAAAA 
TCGCAGGTGA TCATGGATGT AGAAAACCAT CTCTACGCCC GTAAAGATAT TAAGCAACTT 
GGCATTGCGC CGATGACCAG TATGTTTAGC TGTGGGAATA ATGAACGCCG GGTATGCGAC 
ACCATTCATC CGCAAATTCA CGATTCCGAT CGGCTGGCGA TGTGGCGGGG TAACGGCGAG 
TGGATTTGCC GCCCGCTGAA TAATCCGCAG AAATTGCAGT TCAATGCATA TATGGACGAT 
AACCCAAAAG GGTTCGGCCT GCTGCAACTC GATCGTGATT TCTCGCATTA TCAGGATGTG 
ATGGGCTGGT ACAATAAACG TCCGAGCCTG TGGGTGGAGC CGCGCAGTAA GTGGGGGAAA 
GGCGCGGTTA GCCTGATGGA GATCCCAACC ACTGGTGAAA CTCTGGATAA TGTGGTCTGT 
TTCTGGCAGC CGGAAAAAGC GATCAAAGCC GGGGATGCGC TGGCGTTCAA TTATCGTTTG 
TACTGGAGCG CGCAGCCGCC GGTACAATCG CCGCTTGCGC GGGTCATGGC GACCCGTACA 
GGGATGGGCG GATTTCCCGA AGGTTGGGCG CCGGGCGAAC ATTACCCGGA TAAATGGGCG 
CGCCGTTTTG CTATTGATTT TGTCGGCGGC GATCTGAAAG CGGCCGCGCC AAAAGGCATT 
GAGCCGGTGA TTACGCTCTC CAGTGGCGAG GCGAAGCAGA TTGAGATCCT CTACGTAGAG 
CCTTTCGACG GTTATCGTAT CCAGTTTGAC TGGTATCCGA CCTCGGATTC TACGGCACCG 
GTGGATATGC GTATGTTCCT GCGCTGCCAG GGGGAGGCTA TCAGCGAAAC CTGGCTGTAT 
CAGTATTTCC CGCCCGCGCC GGATAAGCGC CGTTATGTCG ACGATCGTAT CATGCGTTAG
 
Protein sequence
MAAVCGSSGI ASLFSQAAFA AESDIADGKI VRFDFAGLQS MAQALAKKPW GGAPGPLPDT 
LANLTPQAYN SIQYDAAHSL WNGVANRQLD IQFFHVGMGF RRRVRMFSVD TTTHLAREIH 
FRPELFKYND AGVDTTQLEG QSDLGFAGFR VFKAPELARR DVVSFLGASY FRAVDDTYQY 
GLSARGLAID TYTDGQEEFP DFTAFWFDTA KPGDTTFTVY ALLDSASVTG AYKFVIHCEK 
SQVIMDVENH LYARKDIKQL GIAPMTSMFS CGNNERRVCD TIHPQIHDSD RLAMWRGNGE 
WICRPLNNPQ KLQFNAYMDD NPKGFGLLQL DRDFSHYQDV MGWYNKRPSL WVEPRSKWGK 
GAVSLMEIPT TGETLDNVVC FWQPEKAIKA GDALAFNYRL YWSAQPPVQS PLARVMATRT 
GMGGFPEGWA PGEHYPDKWA RRFAIDFVGG DLKAAAPKGI EPVITLSSGE AKQIEILYVE 
PFDGYRIQFD WYPTSDSTAP VDMRMFLRCQ GEAISETWLY QYFPPAPDKR RYVDDRIMR