Gene SeSA_A1719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1719 
SymbolsifB 
ID6519271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp1662902 
End bp1663852 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content37% 
IMG OID642746823 
Productsecreted effector protein 
Protein accessionYP_002114626 
Protein GI194734475 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.231302 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.818596 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAATTA CTATCGGGAG AGGGTTTTTA AAGAGTGAGA TGTTTTCTCA AAGTGCCATC 
TCTCAACGCT CCTTCTTTAC GTTACTATGG GAAAAGATTA AAGATTTTTT CTGTAGCACG 
CGAAGATCCG CTGCCGATCA ATATATAAAG GAATTATGTG ATGTTGCCTC TCCGCCTGAC 
GCACAACGTT TATTTGATTT ATTTTGCAAG TTATATGAAT TATCATCACC GTCATGCAAA 
GAAAAATTCC ATTTTCAGCA CTATAAAGAT GGTGAGTATC AATATACAAA TCTCTGCATT 
AAAGATGGCG AAGATATTCC GTTATGCATT GTGATACGTC AGGATCACTA CTATTATGAT 
ATAATGAATA GAACAGTACT CTGTGTTGAT ACTCAGTCTG CCCACCTGAA AAGATATTCT 
GATATTAATA TAAAAACTAG CACTTATGTT TGTGAAGAGC TATGTTGCTT GTTCCCTGAG 
CGGTTACTAC TCTCGCTATC CGGTGGTATA ACATTTTCCG TTGACCTAAA AAATATAAAA 
GAGACGCTTA TCGCCATGGC AGAAAAGGGT AATTTATGTG ACTGGAAGGA ACAGGAAAGA 
AAAGCCGCCA TTTCCTCCAG GATTAGTCTG GGCATCACCC AGGCAGATCT ACCACCTATT 
GACGACGCTA TCAAAAACAA AATAGCCGCA AAGGTTATTG AGGATACTAA CTTAAAGAAT 
GCAACATTTG AACCAAATTA TGCACAAAGC TCAGTTACTC AACTAGTTTA TTCATGTTTG 
TTTAAGAATG AGATATTAAT GAATATGCTT GAGGAAAGTT CCTCTCATGG CCTGCTATGT 
TTAAACGACC TTGTTGAATA TGTAGCGTTA CAAGTTCATA ACAGCCTTTT TTCTGAAGAT 
TTATCTTCAC TCGTTGAAAC AACAAAAAAT GAGGCTCATC ACCAGAGTTG A
 
Protein sequence
MPITIGRGFL KSEMFSQSAI SQRSFFTLLW EKIKDFFCST RRSAADQYIK ELCDVASPPD 
AQRLFDLFCK LYELSSPSCK EKFHFQHYKD GEYQYTNLCI KDGEDIPLCI VIRQDHYYYD 
IMNRTVLCVD TQSAHLKRYS DINIKTSTYV CEELCCLFPE RLLLSLSGGI TFSVDLKNIK 
ETLIAMAEKG NLCDWKEQER KAAISSRISL GITQADLPPI DDAIKNKIAA KVIEDTNLKN 
ATFEPNYAQS SVTQLVYSCL FKNEILMNML EESSSHGLLC LNDLVEYVAL QVHNSLFSED 
LSSLVETTKN EAHHQS