Gene SeSA_A1709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1709 
Symbol 
ID6515964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp1649594 
End bp1650043 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content56% 
IMG OID642746813 
Productinner membrane protein YdcZ 
Protein accessionYP_002114616 
Protein GI194735315 
COG category[S] Function unknown 
COG ID[COG3238] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.0357484 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.809506 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAGT CGCTGACGCT TATCTTTTTG ATCGCCGCCG GCGTCGGGCT GGTGGTACAA 
AACAGTATTA TGGTGCGTAT TACGCAGACA TCATCGACGA TTCTGATCGC TATGCTGTTG 
AACTCGCTGG TAGGGATCGT TTTATTTGTG ACGATATTGT GGTTTAAGCA AGGCGCTGCG 
GGCTTCGGCG AGCTGGTCGC CAGCGTGCGC TGGTGGACAT TGATCCCCGG TCTGCTGGGG 
TCATTTTTTG TATTTGCCAG CATTAGCGGG TATCAGAACG TTGGCGCCGC GACGACTATC 
GCGGTACTGG TCGCCAGCCA GTTAATCGGC GGACTGGCGC TGGATATCGC GCGTAGCCAC 
GGCGTCACGT TACGCGCAAT GGTCGGGCCG GCGTTCGGCG CGCTGTTGCT GGTCATTGGC 
GCATGGCTGA TTGCGAAGCG CCAGTTTTAA
 
Protein sequence
MNQSLTLIFL IAAGVGLVVQ NSIMVRITQT SSTILIAMLL NSLVGIVLFV TILWFKQGAA 
GFGELVASVR WWTLIPGLLG SFFVFASISG YQNVGAATTI AVLVASQLIG GLALDIARSH 
GVTLRAMVGP AFGALLLVIG AWLIAKRQF