Gene SeSA_A1708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1708 
SymbolyncA 
ID6518881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp1649079 
End bp1649594 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content54% 
IMG OID642746812 
Productphosphinothricin acetyltransferase 
Protein accessionYP_002114615 
Protein GI194734599 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.0205864 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.892296 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATTC GCTTTGCCGA TAAAGCAGAC TGCGCCGCGA TTACCGAAAT CTATAACCAT 
GCGGTATTAC ATACTGCGGC CATCTGGAAC GATCGGACGG TCGATACGGA TAATCGCCTT 
GCCTGGTATG AGGCCCGTCA ATTACTGGGC TATCCGGTGC TGGTAAGCGA AGAAAATGGC 
GTAGTGACTG GCTATGCATC ATTTGGCGAC TGGCGCAGTT TTGACGGTTT TCGCTATACC 
GTCGAGCACT CGGTTTATGT TCATCCGGCG CACCAGGGGA AAGGACTGGG GCGAAAACTG 
CTCAGCAGAC TGATCGACGA AGCCCGACGC TGCGGCAAGC ATGTGATGGT GGCCGGTATT 
GAGTCACAGA ATGCCGCCTC AATACGCCTG CATCATTCGC TGGGATTTAC CGTCACCGCG 
CAAATGCCGC AGGTCGGCGT AAAATTTGGC CGTTGGTTAG ATCTTACGTT TATGCAGCTC 
CAGCTTGATG AACACGCCGC GCCGGACGCC TGCTGA
 
Protein sequence
MTIRFADKAD CAAITEIYNH AVLHTAAIWN DRTVDTDNRL AWYEARQLLG YPVLVSEENG 
VVTGYASFGD WRSFDGFRYT VEHSVYVHPA HQGKGLGRKL LSRLIDEARR CGKHVMVAGI 
ESQNAASIRL HHSLGFTVTA QMPQVGVKFG RWLDLTFMQL QLDEHAAPDA C