Gene SeSA_A1706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1706 
Symbol 
ID6517352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp1646832 
End bp1647497 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content47% 
IMG OID642746810 
Productputative DNA-binding transcriptional regulator 
Protein accessionYP_002114613 
Protein GI194736903 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.160126 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.134616 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGGTA CGGAAAAAAC ACAACATATA AGCCTGACCA CACAGGTTGA AAATCGGTTA 
AAGCATCAAT TGTCTATTGG CGCATTAAAA CCAGGCGCAA GGCTTATCAC TAAAAATATC 
GCTCAAGAGT TAGGCGTCAG TATTACGCCG GTGCGTGAGG CTCTGTTAAG GCTGGTCTCT 
TCCAGTGCTT TGGCGGTGGC GCCAGCACAG GCGTTTATGG TGCCGGAGAT CTCGCTGGAA 
AGTTTGCTGG AAATTAATAC GATTCGTACT GCCCTGGAGG AGATGGCGGT GGTCGCCGCT 
GCGGGTAAGA TTACTCCGGA TCGCGAGCAG ACGCTGAATG CGCTATTAGA TGAATTTCAA 
CAGGCGCTGG AAAGTGGCGT TATGGAGAAA ATTCTTTTGG CCAACCGCGC ATTCCGCTTT 
GAGATCTACC ACTACGCGGA TATGCCAACG CTGTATGCCA TGATCGAGCA ATTATGGGTA 
CGCCTGGGGC CAAGCCTGCA TTTTTTATAT GATAATTTTA AACTTGATGA TTATCAAAAC 
GGCGTTAATC TGTACAGAAA ATTGCTTAAT GCGTTAGTGA CTGGTGATAA AGAAGCCAGT 
CGCCACTGCC TACAGAACGT TTTGCAACAA AACGTAGCGA CGATTAAAAA TCAGTACTTC 
ATGTAA
 
Protein sequence
MPGTEKTQHI SLTTQVENRL KHQLSIGALK PGARLITKNI AQELGVSITP VREALLRLVS 
SSALAVAPAQ AFMVPEISLE SLLEINTIRT ALEEMAVVAA AGKITPDREQ TLNALLDEFQ 
QALESGVMEK ILLANRAFRF EIYHYADMPT LYAMIEQLWV RLGPSLHFLY DNFKLDDYQN 
GVNLYRKLLN ALVTGDKEAS RHCLQNVLQQ NVATIKNQYF M