Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A1704 |
Symbol | |
ID | 6515574 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 1643331 |
End bp | 1644392 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642746808 |
Product | hypothetical protein |
Protein accession | YP_002114611 |
Protein GI | 194735817 |
COG category | [S] Function unknown |
COG ID | [COG3391] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.188458 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.230507 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCACTTAC GTCATCTTTT TTCGCCGCGC CTGCGTGGTT CTTTATTGTT AGGTTCGCTC CTCGTCGCAT CCTCATTTAG CACGCTGGCG GCGGAAGACA TGCTGCGTAA AGCGGTAGGC AAAGGCGCTT ATGAGATGGC CTGGAGTCAG CAAGAAAACG CGCTCTGGCT GGCTACATCG CAAAGCCGTA AACTGGATAA AGGCGGCGTA GTTTATCGTC TCGACCCGGT GACGCTGGAA ATCACGCAAG CGATTCATAA CGATCTCAAG CCGTTCGGCG CCACCATCAA TGCCGCGACC CAAACGCTGT GGTTTGGCAA TACCATTAAC AGCGCTGTTA CCGCGATTGA TGCCAAAACG GGTGATGTAA AAGGTCGTCT GGTACTTGAT GCGCGCAAAC GTACTGAAGA GGTTCGTCCG TTACAGCCCC GTGAGCTGGT TGCCGATGCG GCGACCAACA CGATCTACAT TAGCGGTGTT GGTAAAGAGA GTGCTATTTG GGTAGTGGAT GGCGAAACCA TCAAACTGAA AACGACGATC GAAAATACCG GCAAAATGAG TACGGGTCTG GCGCTCGACA GTAAAGCGCA ACGCCTGTAC ACCACCAATG CGGATGGCGA ATTTATCACC ATCGATACCG CCAGCAATAA AATTCTCAGT CGTAAGAAGT TGCTGGATGA CGGTAAAGAA CACTTCTTTA TTAACCTGAG TCTCGATACC GCAGGTCATC GTGCGTTTAT CACCGACTCG AAGGCGACTG AGGTTCTGGT TGTCGATACC CGTAATGGCA ATATTCTTGC CAAAATCGGG GCGCCTGCCT CTTTGGCCGT CCTGTATAAT CCGACACGTA ACGAGGCGTA TGTGACGCAC CGTCAGGCAG GGCAGGTCAG CGTGATCGAT GCGAAGACCT ATAACGTTGT TAAAACGTTC GATACGCCAA CGTACCCGAA TAGCCTGGCG CTATCGGCAG ACGGTAAAAC GCTCTACGTC AGCGTGAAGC AGAAATCGAC ACGTGAACAG GAAGCGACGC AGCCGGATGA TGTTATTCGC ATTGCTCTGT AA
|
Protein sequence | MHLRHLFSPR LRGSLLLGSL LVASSFSTLA AEDMLRKAVG KGAYEMAWSQ QENALWLATS QSRKLDKGGV VYRLDPVTLE ITQAIHNDLK PFGATINAAT QTLWFGNTIN SAVTAIDAKT GDVKGRLVLD ARKRTEEVRP LQPRELVADA ATNTIYISGV GKESAIWVVD GETIKLKTTI ENTGKMSTGL ALDSKAQRLY TTNADGEFIT IDTASNKILS RKKLLDDGKE HFFINLSLDT AGHRAFITDS KATEVLVVDT RNGNILAKIG APASLAVLYN PTRNEAYVTH RQAGQVSVID AKTYNVVKTF DTPTYPNSLA LSADGKTLYV SVKQKSTREQ EATQPDDVIR IAL
|
| |