Gene SeSA_A1692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1692 
Symbol 
ID6516159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp1629162 
End bp1629740 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content56% 
IMG OID642746796 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002114599 
Protein GI194735466 
COG category[S] Function unknown 
COG ID[COG3226] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.474881 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTACC TTAACCGGGA TGAACGCCGC GAAGTGATCC TGCAAGCGGC GATGCGCGTG 
GCGCTGGCAG AGGGGTTTGC CGCCATGACG GTGCGACGTA TCGCATCAGA AGCCGATGTC 
GCCGCCGGAC AGGTGCATCA CCACTTTAGC TCAGCGGGCG AGCTCAAAGC GCTGGCCTTT 
GTCCATTTGA TCCGTACCCT GCTTGATGCC GGGCAAGTTC CGCCGCCCGC CACCTGGCGT 
GCACGGCTTC ACGCTATGTT GGGTAGCGAA GACGGCGGCT TCGAGCCTTA CATAAAATTG 
TGGCGAGAGG CGCAAATTCT GGCTGACCGG GATCCGCACA TCAGAGATGC TTATCTCCTC 
ACGATGCAGA TGTGGCATGA GGAAACGGTC ACAATTATCG AGCAGGGCAA ACAAGCTGGA 
GAATTTACGT TTACTGCTAA CGCCACGGAT ATCGCCTGGC GGCTTATCGC ACTGGTGTGC 
GGGCTGGACG GTATGTATGT GCTGGGTATT CCGGAAATGG CCGATCCCGC GTTTAAATAC 
CATCTGGATC GGATGATTAC GCTTGAACTC TTTGCGTAA
 
Protein sequence
MSYLNRDERR EVILQAAMRV ALAEGFAAMT VRRIASEADV AAGQVHHHFS SAGELKALAF 
VHLIRTLLDA GQVPPPATWR ARLHAMLGSE DGGFEPYIKL WREAQILADR DPHIRDAYLL 
TMQMWHEETV TIIEQGKQAG EFTFTANATD IAWRLIALVC GLDGMYVLGI PEMADPAFKY 
HLDRMITLEL FA