Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A1643 |
Symbol | |
ID | 6515290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 1581260 |
End bp | 1582363 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642746753 |
Product | uptake hydrogenase small subunit |
Protein accession | YP_002114556 |
Protein GI | 194737982 |
COG category | [C] Energy production and conversion |
COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA) [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAACAC AAGATACATT TTATCAAGTT ATGCGTAGAC ACGGCGTGAC AAGGCGTAGC TTCCTCAAGT TTTGCAGCCT TACCGCAACG TCTTTAGGCC TGAGCAGTTC GATGATTCCT CAGATAGCTT ATGCCCTGGA GAATAAACCG CGTACGCCAG TGATATGGCT GCATGGTCTT GAATGTACCT GCTGTACCGA GTCTTTCATT CGCTCTGCGC ACCCGTTGGC AAAAGATGCC ATTCTGTCGC TCATTTCCCT GGATTATGAC GACACCATTA TGGCCGCCGC AGGGCAACAA GCCGAGCAGG CGTTGGCGGA TGTGATGCGC GAGTACAAAG GAAATTATAT CGTTGCCGTG GAAGGTAATG CGCCGCTGAA TGAAGATGGG ATGTTTTGCA TACTGGCTGG CGAGCCGTTC CTGGAGAAGT TAAAACGCGT CAGCGCGGAT GCTAAAGCGA TTATCGCCTG GGGGTCCTGC GCATCATGGG GCTGCGTGCA GGCAGCCCGT CCCAACCCAA CTAAAGCCAC GCCGGTTCAC AAATTAATTA CCGATAAACC CATTATTAAA GTGCCAGGCT GCCCGCCTAT ACCTGAAGTG ATGTCCGCCG TTATCACCTA TATGCTGGCA TTTGATCGCA TCCCTCCCCT TGATCGTCTT GGACGACCAA AAATGTTTTA TGGCCAGCGA ATTCATGACA AATGCTACCG ACGCGCGCAT TTCGATGCCG GTCAGTTTGT GGAAGCGTGG GATGACGAAG GTGCCAGAAA AGGGTATTGC CTGTACAAGA TGGGCTGTAA AGGCCCGACC ACCTATAACG CCTGTTCAAC CGTTCGCTGG AATGATGGCG TGTCTTTTCC TATCCAGTCA GGTCATGGAT GCCTCGGATG TTCGGAAGAT GGATTCTGGG ATTACGGTTC TTTTTACAGC CGGGCAACGG GCATTCCGCA AACCGGCATT GAGGCTACCG CCGATAAAAT CGGACTGGGC GTTGCCGGCG TCGCGGGCGC TGCCGCCATC GCTCACGCCA CGGTGAGCGC CATAAAACAT GCCCGCAATA AAAACAACAC GTCATCAGAA AACGCTCCGG AAGAGAAAAA ATAA
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Protein sequence | MQTQDTFYQV MRRHGVTRRS FLKFCSLTAT SLGLSSSMIP QIAYALENKP RTPVIWLHGL ECTCCTESFI RSAHPLAKDA ILSLISLDYD DTIMAAAGQQ AEQALADVMR EYKGNYIVAV EGNAPLNEDG MFCILAGEPF LEKLKRVSAD AKAIIAWGSC ASWGCVQAAR PNPTKATPVH KLITDKPIIK VPGCPPIPEV MSAVITYMLA FDRIPPLDRL GRPKMFYGQR IHDKCYRRAH FDAGQFVEAW DDEGARKGYC LYKMGCKGPT TYNACSTVRW NDGVSFPIQS GHGCLGCSED GFWDYGSFYS RATGIPQTGI EATADKIGLG VAGVAGAAAI AHATVSAIKH ARNKNNTSSE NAPEEKK
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