Gene SeSA_A1624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1624 
Symbol 
ID6517508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp1564555 
End bp1564938 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content47% 
IMG OID642746735 
ProductDNA-binding transcriptional activator MarA 
Protein accessionYP_002114538 
Protein GI194736798 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.936948 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGAC GCAACACTGA CGCTATTACT ATTCATAGCA TTTTGGACTG GATCGAGGAT 
AACCTGGAGT CGCCGCTCTC ACTGGAAAAA GTGTCTGAGC GTTCAGGATA TTCCAAATGG 
CACCTGCAAC GGATGTTTAA AAAAGAGACC GGTCATTCAT TAGGCCAATA CATCCGCAGC 
CGTAAAATGA CGGAAATCGC GCAAAAATTA AAAGAGAGCA ACGAGCCCAT TCTCTATCTG 
GCGGAACGCT ATGGCTTTGA GTCACAGCAA ACATTGACCC GGACGTTCAA AAACTATTTT 
GATGTGCCGC CACACAAATA CCGGATCACC AATATGCATG GCGAATCACG GTATATGCTG 
CCGCTGAACC ATGGCAACTA CTAG
 
Protein sequence
MSRRNTDAIT IHSILDWIED NLESPLSLEK VSERSGYSKW HLQRMFKKET GHSLGQYIRS 
RKMTEIAQKL KESNEPILYL AERYGFESQQ TLTRTFKNYF DVPPHKYRIT NMHGESRYML 
PLNHGNY