Gene SeSA_A1613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1613 
Symbol 
ID6516760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp1555448 
End bp1556134 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content51% 
IMG OID642746724 
Producttranscriptional regulator, GntR family 
Protein accessionYP_002114527 
Protein GI194734153 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.419265 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTCG AAACGCAGCT TAACCCTACA CAGCCTGTCA ACCAGCAAAT TTACCGTATT 
CTTCGGCGTG ATATCGTGCA TTGTCTGATC CCGCCTGGCA CGCCGCTATC AGAAAAAGAG 
GTCTCAACCC GTTTTAACGT TTCGCGTCAA CCGGTGCGCG AGGCTTTTAT AAAGCTGGCG 
GAAAATGGGT TGATTCAGAT CCGCCCTCAG CGCGGTAGTT ATGTGAATAA GATTTCGCTT 
TCTCAGGTAC AGAATGGCTG CTTTGTTCGG CAGGCGATCG AATGCGCGGT GGTCCGCCGT 
GCGGCGGCGA TGATCACCGA CAACCAGTGC TATCAACTGG CGCAAAACCT GCACCTGCAA 
CATATTGCCA TCGAGCGCAA ACAGATTGAT GATTTTTTCC AGCTTGATGA CGATTTCCAC 
CAAAAGCTGG CGCAGATCGC CGATTGCCAG TTAGCGTGGG ATACCATTGA AAATATCAAA 
GCGACAATCG ACCGGGTTCG CTATATGAGT CTGGATCATG TTTCTCCGCC GGAGATGTTG 
TTGCGCCAGC ACCATGATAT TTTCTCCGCG CTGGAAAATC GTGACGGCAA TGCGGTTGAG 
AGCGCAATGA CCCAGCATTT GCAGGAAATT AGCGAATCCG TCCAGCTTAT CCGTCAGGAA 
AACAGCGGCT GGTTTAGCGA AGACTAA
 
Protein sequence
MTVETQLNPT QPVNQQIYRI LRRDIVHCLI PPGTPLSEKE VSTRFNVSRQ PVREAFIKLA 
ENGLIQIRPQ RGSYVNKISL SQVQNGCFVR QAIECAVVRR AAAMITDNQC YQLAQNLHLQ 
HIAIERKQID DFFQLDDDFH QKLAQIADCQ LAWDTIENIK ATIDRVRYMS LDHVSPPEML 
LRQHHDIFSA LENRDGNAVE SAMTQHLQEI SESVQLIRQE NSGWFSED