Gene SeSA_A1594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1594 
Symbol 
ID6515763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp1537133 
End bp1537780 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content55% 
IMG OID642746705 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002114508 
Protein GI194737451 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1174] ABC-type proline/glycine betaine transport systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.353081 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACGA TACATTATAT GCTGGATAAC GCAGGCTATC TCGCCAGCCT TACCTTTCAG 
CATCTCTGGC TGGTCGCGCT GGCCGTCGGT CTGGCGATTA TCATCGGCGT ACCGTTAGGC
GTTTTGATTG TACGCCACAA ATGGCTGGCA ACGCCGGTAT TGGGCGCCGC CACGCTACTT
CTTACCATTC CGTCTATCGC GCTGTTTGGA TTAATGATCC CGCTCTTTTC GCTGATCGGG
CATGGTATTG GCGTTCTGCC CGCCGTGACG GCCGTTTTTC TCTACTCTTT ACTGCCGATT
GTCCGTAATA CCCATACTGC GCTTGATAGT TTGCCGCCCG GTCTGCGTGA AGCGGGACGC
GGCATCGGTA TGACTTTCTG GCAACGGCTG CGCTGGGTCG AAATCCCAAT GGCCCTACCG
GTTATTTTCG GGGGTATCCG CACCGCGGTA GTGATGAATA TCGGCGTGAT GGCGATTGCC
GCGGTGATCG GTGCCGGCGG TCTGGGGCTG CTACTGTTAA ACGGCATTAG CGGCAGCGAT
ATTCGCATGT TAATTGCCGG CGCGCTGATG ATCTGTCTAC TGGCAATTGT ACTTGACTGG
CTGTTGCATC GTCTGCAAGT CGTACTGACA CCTAAGGGGA TACGATAA
 
Protein sequence
MDTIHYMLDN AGYLASLTFQ HLWLVALAVG LAIIIGVPLG VLIVRHKWLA TPVLGAATLL 
LTIPSIALFG LMIPLFSLIG HGIGVLPAVT AVFLYSLLPI VRNTHTALDS LPPGLREAGR
GIGMTFWQRL RWVEIPMALP VIFGGIRTAV VMNIGVMAIA AVIGAGGLGL LLLNGISGSD
IRMLIAGALM ICLLAIVLDW LLHRLQVVLT PKGIR