Gene SeSA_A1592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1592 
Symbol 
ID6517344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp1534560 
End bp1535849 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content58% 
IMG OID642746703 
Productputative voltage-gated ClC-type chloride channel ClcB 
Protein accessionYP_002114506 
Protein GI194735503 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0733959 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCGTT TACACGCTTA CCCGGATCTG CGCGCGATGT TTCGTCGCCT GCTGATCGCT 
ACGCTCATTG GTATTCTCGC GGCGCTGGCT GTCGCCGCCT TCCGTCATGC GATGCAATTG
CTGGAGTGGA TTTTCCTGAG TAATGACACC GGCAGTCTGG TGAATGCGGC TGAGGGGCTT
TCGCCCTGGC GACGGCTGAT TACGCCGGCG CTTGGCGGCC TGGCCGCTGG TCTGTTGCTG
TGGGGGTGGC AAAAAATGAA CCAACAGCGC CCCCATGCGC CCACTGACTA TATGGAAGCA
TTGCAAACCG ACGGGCAATT TGACGTTGGC GCCAGTCTGG TGAAATCGCT GGCCTCGCTG
CTGGTCGTGG TCAGCGGCAG CGCAATTGGT CGCGAAGGCG CAATGATCCT CCTCGCCTCG
CTGGCGGCAT CCAGCTTTGC CAGACGCTTC ACGCCGCGTG AGGAATGGAA ATTATGGATC
GCCAGCGGTG CCGCTGCGGG CATGGCGGGC GCTTACCATG CGCCGCTGGC GGGCAGCCTG
TTTATCGCGG AAATCCTGTT CGGTACCTTA ATGCTGGCTT CCCTCGGCCC GGTTGTCGTT
TCCGCCGTCG TCGCCCTGCT AACCACCCAT GTATTAAACG GTAGCGATTC ACTACTCTAT
ACCGTACATC TGACCGTTGA TCTCCACGCG CGGGAGTACG TCATGATAGT CAGTACCGGT
CTGGTCGCCG GTCTGTGCGG CCCATTGCTG ATGTGGCTGA TGACGGCCAG CCATAATAGT
TTCTTACGCT TAAAATTGTC GCCGCCCTGG CAACTGGCGT TGGGCGGGCT TATTGTCGGA
TTACTGTCGT TACTCACGCC CACGGTATGG GGAAACGGCT ATAGCGTCGT ACAATCATTT
TTGCTCTCCC CGCCGCTATT CTCGCTGATT GGCGGAATTT TTGTGTGCAA AATCCTGGCG
GTGCTCGCCA GCAGCGGGTC TGGCGCGCCG GGCGGCGTCT TTACGCCAAC ATTATTTGTC
GGATTATCAA TTGGAATGTT TCTGGGTCGG ATATGGGGAT TCTGGCTGCC AGGCTCGGAT
GAAATAGCGA TTTTATTGGG GCTGGCGGGT ATGGCGACGC TACTGGCGGC GACAACCCAT
GCGCCGATAA TGTCCACCCT GATGATTTGT GAAATGACCG GCGAGTATCA GTTACTCCCC
GGTCTGCTGA TTGCCTGTGT AGTCGCGTCA GTGCTCTCGC GAACGTTACG CCATGATTCT
ATCTACCGCC AGCACGCTGC CGAGCATTGA
 
Protein sequence
MHRLHAYPDL RAMFRRLLIA TLIGILAALA VAAFRHAMQL LEWIFLSNDT GSLVNAAEGL 
SPWRRLITPA LGGLAAGLLL WGWQKMNQQR PHAPTDYMEA LQTDGQFDVG ASLVKSLASL
LVVVSGSAIG REGAMILLAS LAASSFARRF TPREEWKLWI ASGAAAGMAG AYHAPLAGSL
FIAEILFGTL MLASLGPVVV SAVVALLTTH VLNGSDSLLY TVHLTVDLHA REYVMIVSTG
LVAGLCGPLL MWLMTASHNS FLRLKLSPPW QLALGGLIVG LLSLLTPTVW GNGYSVVQSF
LLSPPLFSLI GGIFVCKILA VLASSGSGAP GGVFTPTLFV GLSIGMFLGR IWGFWLPGSD
EIAILLGLAG MATLLAATTH APIMSTLMIC EMTGEYQLLP GLLIACVVAS VLSRTLRHDS
IYRQHAAEH