Gene SeSA_A1581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1581 
SymboltqsA 
ID6516568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp1526260 
End bp1527294 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content49% 
IMG OID642746692 
Productputative transport protein 
Protein accessionYP_002114495 
Protein GI194735679 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.180816 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAC CGATCATCAC GCTCAATGGT CTAAAAATCG TCATTATGCT GGGAATGCTG 
GTGGTTATTC TGAGCGGTAT CCGCTTCGCC GCAGATATCA TTGTTCCCTT TATTTTGGCG 
TTATTTATTG CAGTCGTTCT CAATCCCGTT GCGCAACGGA TGACCCGATG CCGAATTCCG 
CGCGTTATCG CCGTATCATT GCTCATTGTG ATTATTGTTA TGTTAATGGT ACTGCTACTG 
GCCTATTTGG GGACATCATT AAATGAACTG GCTCGTACCC TACCACAATA TCGCTCCTCA 
TTGGTGATAC CGTTGCAACG TATTGAACCG TGGTTACAGC GAGCAGGCAT TGGCGTGTCG 
GTTGATGAGC TGGCGAAATA TATCGATCCA AACGCCGCCA TGACTCTGGT AACGAACCTG 
CTCACCCAGC TGTCCAATGC CATGTCGTCC ATCTTTTTAT TGTTATTGAC CGTGGTATTT 
ATGCTGCTGG AGGTTCCACA ATTGCCTGAA AAACTGCAGC AGATGATGAG CCGTCCGGTG 
GAAGGCATGG CGGCAATTCA ACGCGCGCTT GATAGCGTTT CCCATTATCT GGTGTTAAAA 
ACAGCGATCA GTATCGTGAC GGGGCTGGTC GCATGGGGAA TGCTGGCCGC GCTGGATGTC 
CGCTTCGCCT TTGTCTGGGG TCTACTGGCC TTCGCGCTGA ACTATATTCC TAATATTGGA 
TCGGTGCTCG CTGCCCTGCC GCCCATTATT CAGGTGCTGG TATTTAACGG GTTTTATGAT 
GCGCTGCTGG TGCTGGCAGG CTATCTGCTG ATTAATCTGG TCTTCGGCAA TATCCTTGAG 
CCACGTATCA TGGGACGTGG TTTAGGCCTT TCAACCTTAG TGGTATTTTT GTCGTTAATT 
TTCTGGGGCT GGCTATTAGG TCCGGTGGGC ATGTTGCTCT CCGTTCCGTT AACCATCATT 
GTCAAAATCG CCCTCGAACA GACCACCGGC GGGCAGAGTA TCGCCGTTCT GCTTAGCGAT 
TTAAACAAAA GATAA
 
Protein sequence
MAKPIITLNG LKIVIMLGML VVILSGIRFA ADIIVPFILA LFIAVVLNPV AQRMTRCRIP 
RVIAVSLLIV IIVMLMVLLL AYLGTSLNEL ARTLPQYRSS LVIPLQRIEP WLQRAGIGVS 
VDELAKYIDP NAAMTLVTNL LTQLSNAMSS IFLLLLTVVF MLLEVPQLPE KLQQMMSRPV 
EGMAAIQRAL DSVSHYLVLK TAISIVTGLV AWGMLAALDV RFAFVWGLLA FALNYIPNIG 
SVLAALPPII QVLVFNGFYD ALLVLAGYLL INLVFGNILE PRIMGRGLGL STLVVFLSLI 
FWGWLLGPVG MLLSVPLTII VKIALEQTTG GQSIAVLLSD LNKR