Gene SeSA_A1578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1578 
Symbol 
ID6515642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp1521686 
End bp1522630 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content54% 
IMG OID642746689 
Productprotein YdgH 
Protein accessionYP_002114492 
Protein GI194734995 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.505829 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.109067 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTTA AGAACACTCT CCTGGCGTCG GCACTGCTTT CTGCGGCTGC TTTTTCTGTC 
CATGCAGCAA CAGAACTGAC GCCGGAGCAA GCGGCTGCAC TAAAACCTTA TGACCGCATC 
GTTATTACCG GTCGTTTTAA TGCTATTGGC GATGCGGTCT CCGCCGTGTC CCGCCGCGCA 
GATAAAGAAG GCGCAGCCTC CTTCTATGTT GTCGACACCT CGGAGTTCGG CAACAGTGGT 
AACTGGCGTG TTGTGGCGGA CGTGTATAAA GCCGACGCGC CGAAAGCCGA CGCGCCCAAA 
AATCGTGTCA TTAATGGCAT CGTGGAATTA CCGAAAGACC AGGCCGTACA ATTAGAACCG 
TATGACACCG TCACCGTTCA GGGCTTCTAC CGTAGCCAGC CGGAAGTTAA CGATGCCATT 
ACGAAAGCGG CGAAACAGAA AGACGCATAC GCTTTCTATA TTGTTCGTCA GGTGGATGCG 
AATCAGGGCG GAAACCAGCG CATCACTGCA TTTATCTATA AACAAGATGC AAAAAAACGC 
ATCGTCCAGA GCCCGGACGC TATTCCGGCG GACTCTGAAG CTGGCCGCGC CGCGCTGGCT 
CAGGGCGGCG AAGCTGCGAA GAAAGTCGAA ATTCCAGGCG TCGCTACGTC AGCCTCGCCG 
AGCGCCGAAG TAGGCCGTTT CTTCGAAACG CAATCCACCA AAGGCGGGCG TTACACTGTC 
ACACTTCCGG ATGGCACAAA AGTTGAGGAG CTGAATAAAG CGACGGCTGC GATGATGGTG 
CCTTTCGACA GCGTTAAGTT CACCGGCAAC TACGGCAATA TGACAGAAAT CTCCTACCAG 
GTCGCCAAAC GCGCGGCGAA GAAAGGCGCT AAGTATTATC ATATTACGCG TCAGTGGCAG 
GAGCGCGGCA ATAACATCAC CATCAGCGCC GACCTCTATA AATAA
 
Protein sequence
MKLKNTLLAS ALLSAAAFSV HAATELTPEQ AAALKPYDRI VITGRFNAIG DAVSAVSRRA 
DKEGAASFYV VDTSEFGNSG NWRVVADVYK ADAPKADAPK NRVINGIVEL PKDQAVQLEP 
YDTVTVQGFY RSQPEVNDAI TKAAKQKDAY AFYIVRQVDA NQGGNQRITA FIYKQDAKKR 
IVQSPDAIPA DSEAGRAALA QGGEAAKKVE IPGVATSASP SAEVGRFFET QSTKGGRYTV 
TLPDGTKVEE LNKATAAMMV PFDSVKFTGN YGNMTEISYQ VAKRAAKKGA KYYHITRQWQ 
ERGNNITISA DLYK