Gene SeSA_A1572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1572 
Symbol 
ID6519179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp1517129 
End bp1518271 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content46% 
IMG OID642746684 
Productouter membrane protein N 
Protein accessionYP_002114487 
Protein GI194737249 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0737338 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAA AAGTATTGGC ACTTGTCATC CCGGCTCTGC TGGCTGCTGG CGCGGCACAC 
GCCGCTGAAG TCTATAACAA AGACGGCAAT AAGCTGGACC TTTACGGGAA AGTAGACGGC
CTGCACTATT TCTCTGACAA TAGTGGCTCT GACGGCGACC AAACCTATGT TCGTTTCGGT
TTTAAAGGCG AAACGCAGAT TAACGACCAA CTGACCGGTT ACGGCCAGTG GGAATATAAC
GTTCAGGCTA ACACTACCGA AGGCGAAGGC GCTAATTCCT GGACTCGTCT GGCATTCGCC
GGCCTGAAAT TCGGCGACTA CGGCTCATTC GACTATGGTC GTAACTACGG CGTCCTGTAC
GACGTGGAAG GTTGGACCGA TATGCTGCCT GAGTTCGGCG GCGACTCCTA TACTTACGCA
GACAACTACA TGACCGGTCG TGCTAACGGC GTGGCCACCT ACCGTAACAC TGATTTCTTC
GGTCTGGTAG ACGGTCTGAG TTTTGCTCTA CAATACCAGG GCAATAATGA AAATAGCGGT
AACGGTAATG AAGGTACAAA TAACCGTACT GATGATGACG ATTTCCGTAG AGAAAACGGA
GATGGTTTTG GTATTTCTAC CACTTACGAT TTTGGCATGG GCTTTAGCGC AGGTGCTGCT
TACACAACAT CTGACCGTAC AAACGATCAG GTTTCGCGTG GCGAACAGTA TGCAAAAGGC
GATAAAGCAG ATGCATGGAC TGCTGGCTTG AAATATGATG CCAACAACAT CTATTTAGCC
ACTATGTATT CTGAAACCCG GAATATGACG CCATATGGCT CTTTGGATTC TTATGCTCAT
GGTGGTGTGG CTAATAAAAC ACAAAACTTT GAAGTTACTG CGCAGTACCA ATTTGATTTC
GGTTTACGTC CGGCAGTTTC CTTCCTGATG TCTAAAGGTA AAGACCTTGT CAATAACGGC
GTAAATGATG ACAAAGATTT GGTTAAATAT GCTGATGTAG GTGCTACCTA CTATTTCAAC
AAAAACTTCT CCACCTATGT TGATTATAAA ATCAACCTGC TGGATGACGA CGATAACTTC
TATGCAGATA ACGGCATTAA TACCGATGAC GTTGTCGCGC TGGGTATGGT TTACCAGTTC
TAA
 
Protein sequence
MKRKVLALVI PALLAAGAAH AAEVYNKDGN KLDLYGKVDG LHYFSDNSGS DGDQTYVRFG 
FKGETQINDQ LTGYGQWEYN VQANTTEGEG ANSWTRLAFA GLKFGDYGSF DYGRNYGVLY
DVEGWTDMLP EFGGDSYTYA DNYMTGRANG VATYRNTDFF GLVDGLSFAL QYQGNNENSG
NGNEGTNNRT DDDDFRRENG DGFGISTTYD FGMGFSAGAA YTTSDRTNDQ VSRGEQYAKG
DKADAWTAGL KYDANNIYLA TMYSETRNMT PYGSLDSYAH GGVANKTQNF EVTAQYQFDF
GLRPAVSFLM SKGKDLVNNG VNDDKDLVKY ADVGATYYFN KNFSTYVDYK INLLDDDDNF
YADNGINTDD VVALGMVYQF