Gene SeSA_A1570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1570 
Symbol 
ID6515381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp1513857 
End bp1515158 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content54% 
IMG OID642746682 
Productsensor protein RstB 
Protein accessionYP_002114485 
Protein GI194738016 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0165885 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0828626 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGC TGTTTGTGCA GTTTTACCTT TTGCTGTTCG TCTGTTTTCT GGTCATGACC 
TTATTGGTCG GACTGGTGTA CAAATTCACT GCCGAACGCG CGGGCAGGCA ATCGCTCGAC 
GATCTGATGA AAAGTTCGCT CTATCTGATG CGCAGCGAAC TGCGGGAAAT TCCGCCGCGT 
GAATGGGGGA AAACGTTAAA AGAGATGGAC CTGAACCTCT CTTTCGATTT ACGCGTTGAA 
CCGTTAAATC ACTATAAGCT TGATGCCGCC ACCACGCAGC GACTGCGTGA AGGCGATATT 
GTCGCGCTTG ACGATCAATA CACCTTTATT CAGCGTATCC CGCGCAGCCA TTACGTCCTG 
GCGGTTGGCC CGGTTCCCTA CCTCTATTTC CTGCATCAAA TGCGACTGCT GGATATCGCC 
TTAATGGCGC TCATTGCCTT TTCTCTCGCC TTTCCTGTGT TTATCTGGAT GCGCCCGCAC 
TGGCAAGAAA TGCTCAGGCT CGAATCCGCC GCGCAGCGCT TTGGCGAGGG TCATTTGACT 
GAACGCCTGC ATTTCGATAA TGGTTCCAGT TTCGAACGTC TGGGCGTCGC GTTCAACCAG 
ATGGCGGATA ATATTAATGC TCTGATCGCC AGTAAAAAAC AGCTGATTGA CGGTATCGCC 
CATGAGCTTC GCACGCCGCT GGTACGTTTA CGCTATCGGC TTGAAATGAG TGAAAACCTT 
ACACCGCCGG AATCACAGGC GCTCAATCGC GATATTGGTC AACTGGAAGC GCTGATTGAA 
GAACTGCTCA CCTATGCGCG CCTTGACCGA CCACAAAATG AACTGATGTT GACCGAACCC 
GACCTCCCCG CCTGGTTGCT CGCGCATTTG CAGGATGTGC AGAGCGTGAC CCCGGAACGC 
GCCGTAAACC TTCTCACATC TGTAATCGGC GATTATGGCG CGCTTGATAT GCGGTTAATG 
TCGCGAGTGC TGGATAACCT GCTGAATAAT GCGTTGCGCT ACAGTCGTAC CACCGTTCAG 
GTCAGTCTGT TACTCGACGG CAGTCAGGCA GCGTTGATAG TCGAAGATGA CGGCCCCGGC 
ATTGAAGCGG ATGCCCGAGA GCGCGTATTT GAACCTTTTG TCAGACTCGA CCCCAGTAGA 
GACCGGGCGA CAGGCGGCTG CGGGCTTGGA CTCGCCATCG TACACTCTAT CGCCCTGGCG 
ATGGGCGGTA GCGTCGTCTG TGACGAGAGC GAACTGGGCG GCGCAAAATT TAGCTTTCAC 
TGGCCGGTCT GGCACGCGAT GCCCGACATG ACCGCTGCCT GA
 
Protein sequence
MKKLFVQFYL LLFVCFLVMT LLVGLVYKFT AERAGRQSLD DLMKSSLYLM RSELREIPPR 
EWGKTLKEMD LNLSFDLRVE PLNHYKLDAA TTQRLREGDI VALDDQYTFI QRIPRSHYVL 
AVGPVPYLYF LHQMRLLDIA LMALIAFSLA FPVFIWMRPH WQEMLRLESA AQRFGEGHLT 
ERLHFDNGSS FERLGVAFNQ MADNINALIA SKKQLIDGIA HELRTPLVRL RYRLEMSENL 
TPPESQALNR DIGQLEALIE ELLTYARLDR PQNELMLTEP DLPAWLLAHL QDVQSVTPER 
AVNLLTSVIG DYGALDMRLM SRVLDNLLNN ALRYSRTTVQ VSLLLDGSQA ALIVEDDGPG 
IEADARERVF EPFVRLDPSR DRATGGCGLG LAIVHSIALA MGGSVVCDES ELGGAKFSFH 
WPVWHAMPDM TAA