Gene SeSA_A1558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1558 
Symbol 
ID6518904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp1498913 
End bp1499386 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content52% 
IMG OID642746670 
Productinner membrane protein YdgK 
Protein accessionYP_002114473 
Protein GI194737091 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.00206467 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTTA ACGCGCGTAA CCCCGGAGAA GATATGACTA CAACACCGCC ACAACGAATT 
GGAGGCTGGC TTCTTGGCCC GTTAGCCTGG CTGTTAGTCG CGTTGTTGAG CGCCTCGCTG 
GCGTTATTAC TCTACGTTAT GGCGCTTGCC ACACCGCAAA CGTTCAAGAC GCTTAGCGGA 
CAGGAAACCG GTAATTTACT GCTATGGGGC ATTTCATTTA TTACCGCTAT CGCCATGTGG 
TACTATACCC TGTGGTTGAC GATCGCATTC TTCAAGCGCA GACGCTGCGT GCCGAAGCAT 
TACATTATCT GGCTGCTGGT GTCGGTGTTA CTGGCGGTTA AAGCATTTGC CTTTTCGCCC 
GTCTCAGATG CCTTTGCCGT GCGTCAGTTA CTCTTCCCAC TGTTGGCGAC GGCGCTCATT 
GTGCCTTATC TCAAACGTTC AGCGCGCGTT AAAACAACGT TTGTTAATCC GTAA
 
Protein sequence
MTVNARNPGE DMTTTPPQRI GGWLLGPLAW LLVALLSASL ALLLYVMALA TPQTFKTLSG 
QETGNLLLWG ISFITAIAMW YYTLWLTIAF FKRRRCVPKH YIIWLLVSVL LAVKAFAFSP 
VSDAFAVRQL LFPLLATALI VPYLKRSARV KTTFVNP