Gene SeSA_A1542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1542 
Symbol 
ID6517608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp1484283 
End bp1484750 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content54% 
IMG OID642746654 
Productouter membrane lipoprotein pcp 
Protein accessionYP_002114457 
Protein GI194736925 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3133] Outer membrane lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.318649 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAAC GTGTACTGGC CGTTTCACTG ATGGGGTTAT CCTTAGCGGG GTGTGTTAAC 
AATGATAGCC TTTCGGGTGA TGTTTATACC GCATCCGAGG CTAAACAAGT TCAGAATGTA 
ACGTACGGTA CTATCGTTAA CGTTCGTCCG GTTCAAATTC AGGGCGGTGA TGATTCTAAC 
GTGATTGGCG CTATCGGCGG CGCGGTGTTG GGCGGATTCC TCGGCAACAC TATCGGCGGC 
GGTACGGGTC GTTCACTGGC GACCGCGGCA GGCGCGGTGG CTGGCGGCGT AGCGGGCCAG 
GGCGTCCAGA GCGCAATGAA TAAAACCCAG GGTGTGGAAC TGGAAATTCG TAAAGACGAT 
GGCAACACCA TTATGGTTGT GCAGAAACAA GGAAATACGC GTTTCTCGGC AGGTCAGCGT 
GTCGTGCTGG CCAGCAATGG CAGCCAGGTT ACTGTCTCTC CACGCTAA
 
Protein sequence
MIKRVLAVSL MGLSLAGCVN NDSLSGDVYT ASEAKQVQNV TYGTIVNVRP VQIQGGDDSN 
VIGAIGGAVL GGFLGNTIGG GTGRSLATAA GAVAGGVAGQ GVQSAMNKTQ GVELEIRKDD 
GNTIMVVQKQ GNTRFSAGQR VVLASNGSQV TVSPR