Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A1539 |
Symbol | |
ID | 6516249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 1482501 |
End bp | 1483361 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642746651 |
Product | putative auxiliary transport protein, membrane fusion protein (MFP) family |
Protein accession | YP_002114454 |
Protein GI | 194735533 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.338335 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTTAA AAACAATAAA ATATTTTTCT ACTCTCATTG TCGCCGTCGT CGCCGTTCTG GCCGCGTGGT GGTTATGGAA TTACTATATG CAATCGCCAT GGACACGCGA TGGTAAAATC CGCGCGGAAC AGGTCAGCGT AACGCCGCAG GTTTCTGGCA GCATTACCCA ACTCAATATC AAAGATAATC AGTTCGTCAA CGCCGGGGAC GTTCTTTTTG TCATTGATAA AACGCCCTTC CATATTGCAG AACTTAACGC GCAGGCGCAG TTGGCCAAAG CGCAGTCCGA TCTGGCAAAA GCGAATAATG AAGCCGACCG ACGTCGACAT TTATCGCGTA ACTACATCTC TGCTGAAGAT CTGGATAGCG CCAATCTGAA TGTTAAAGCG ATGCAGGCCA ACGTAGATGT CGCACTGGCA ACGTTAAAAC AGGCGCAGTG GCAGCTTAGC CAGACGGAAG TAAAAGCGCC GGTATCCGGC TGGGTGACCA ACCTTTCCAC GCGTACCGGT GATTATGCCA GTACCGGTAA GCCACTTTTC GCCCTGGTAG ATAGCCATTC ATTTTATGTA ATGGGATATT TCGAAGAAAC CAAACTACGC CATATCCGCG AAGGTGAGCC TGCATTAATA ACACTGTATA GTGGCAATAT TAAGTTACAG GGTCACGTTG GCAGTATCGG GCGCGCTATT TACGACCAAA GCGTGGAAAG CGACTCCGGT TTAGTGCCCG ATATCAAACC CAACGTACCG TGGGTACGTC TGGCGCAACG CGTACCGGTA CGTATCGAAT TTGACGCTTT GCCGCAGGAT ATCACGCTCG TCTCCGGCAC TACCTGCAGC GTAGCCATTG GACAGCGGTA A
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Protein sequence | MSLKTIKYFS TLIVAVVAVL AAWWLWNYYM QSPWTRDGKI RAEQVSVTPQ VSGSITQLNI KDNQFVNAGD VLFVIDKTPF HIAELNAQAQ LAKAQSDLAK ANNEADRRRH LSRNYISAED LDSANLNVKA MQANVDVALA TLKQAQWQLS QTEVKAPVSG WVTNLSTRTG DYASTGKPLF ALVDSHSFYV MGYFEETKLR HIREGEPALI TLYSGNIKLQ GHVGSIGRAI YDQSVESDSG LVPDIKPNVP WVRLAQRVPV RIEFDALPQD ITLVSGTTCS VAIGQR
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