Gene SeSA_A1534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1534 
Symbol 
ID6515722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp1477997 
End bp1478596 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content55% 
IMG OID642746646 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002114449 
Protein GI194737438 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.239413 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAGC AAACCGAACA CGATACCCGC GAACATCTGC TGGCCACCGG CGAGCAGCTT 
TGTATGCAAC GGGGTTTTAC CGGCATGGGG CTTAGCGAGT TGCTCAAAAC CGCCCAGGTG 
CCTAAAGGGT CGTTTTATCA CTACTTTCGC TCGAAAGAAG CCTTCGGCGT CGCCATGCTT 
GAACGACATT ACGCCTGCTA TCATCAGCGT CTTACGGCGC ACTTCACCTC CGGTCCCGGT 
AATCATCGCG ATCGTCTTCT CGCCTGGTAT CAGGAAACGT TAAAGCAGTT TTGCCAGCAA 
GGCACCATCA GCGGTTGCCT GACGGTGAAA CTGTCAGCGG AAGTCTGCGA TCTGTCGGAG 
GATATGCGCT CTACGATGGA TAAAGGGGCG CAGGAGATCA TGGCACTGCT TGCACGCGCG 
CTGGAAGATG GCCGTAATAG CCACTGTTTA CATTTCACCG GCCAGCCGTT GCCGCAGGCG 
CAGGTACTTT ATGCCCTGTG GCTGGGCGCC AATTTGCAGG CCAAAATATC CCGTAGCGCC 
GCGCCACTGG AAAATGCGTT GGCGCATGTT AAGACCATCA TTGCAACGCC TGAGCTGTAA
 
Protein sequence
MNKQTEHDTR EHLLATGEQL CMQRGFTGMG LSELLKTAQV PKGSFYHYFR SKEAFGVAML 
ERHYACYHQR LTAHFTSGPG NHRDRLLAWY QETLKQFCQQ GTISGCLTVK LSAEVCDLSE 
DMRSTMDKGA QEIMALLARA LEDGRNSHCL HFTGQPLPQA QVLYALWLGA NLQAKISRSA 
APLENALAHV KTIIATPEL